"sourceDb<-"-methods	sourceId-methods
"sourceId<-"-methods	sourceId-methods
abstract,psimi25GraphBase-method	psimi25Graph-class
attributesList	complexName
attributesList,attributesListBase-method	psimi25Complex-class
availableXrefs	availableXrefs
availableXrefs,list-method	availableXrefs-methods
availableXrefs,psimi25InteractionEntry-method	availableXrefs-methods
availableXrefs,psimi25Interactor-method	availableXrefs-methods
availableXrefs-methods	availableXrefs-methods
bait	bait
bait,psimi25Interaction-method	psimi25Interaction-class
BIOGRID.PSIMI25	BIOGRID.PSIMI25
buildPCHypergraph	buildPCHypergraph
complexEntry2graph	psimi25XML2Graph
complexes	complexes
complexes,psimi25ComplexEntry-method	psimi25ComplexEntry-class
complexes,psimi25Hypergraph-method	psimi25Hypergraph-class
complexName	complexName
complexName,psimi25Complex-method	psimi25Complex-class
confidenceValue	bait
confidenceValue,psimi25Interaction-method	psimi25Interaction-class
CORUM.PSIMI25	BIOGRID.PSIMI25
DIP.PSIMI25	BIOGRID.PSIMI25
edgeLabel	psimi25Hypergraph-class
edgeLabel,psimi25Hypergraph-method	psimi25Hypergraph-class
eListHandler	eListHandler
getAbstractByPMID	getAbstractByPMID
graphConverter	graphSpeciesConverter
HPRD.PSIMI25	BIOGRID.PSIMI25
hyperedgeNodes	psimi25Hypergraph-class
hyperedgeNodes,Hypergraph-method	psimi25Hypergraph-class
hyperedgeNodes,psimi25Hypergraph-method	psimi25Hypergraph-class
hyperGraphConverter	graphSpeciesConverter
iListHandler	eListHandler
inhibitor	bait
inhibitor,psimi25Interaction-method	psimi25Interaction-class
initialize,Hypergraph-method	psimi25Hypergraph-class
initialize,psimi25Hypergraph-method	psimi25Hypergraph-class
INTACT.PSIMI25	BIOGRID.PSIMI25
interactionEntry2graph	psimi25XML2Graph
interactions	interactions
interactions,psimi25InteractionEntry-method	psimi25InteractionEntry-class
interactionType	interactionType
interactionType,psimi25Interaction-method	psimi25Interaction-class
interactionType,psimi25InteractionElementType-method	interactionType
interactorInfo	interactorInfo
interactorInfo,list-method	interactorInfo-methods
interactorInfo,psimi25ComplexEntry-method	interactorInfo-methods
interactorInfo,psimi25Graph-method	interactorInfo-methods
interactorInfo,psimi25Hypergraph-method	psimi25Hypergraph-class
interactorInfo,psimi25InteractionEntry-method	interactorInfo-methods
interactorInfo-methods	interactorInfo-methods
interactors	interactors
interactors,interactorListBase-method	interactors
interactors,psimi25ComplexEntry-method	psimi25ComplexEntry-class
interactors,psimi25InteractionEntry-method	psimi25InteractionEntry-class
interactors-methods	interactors
interactors<-	interactors
interactors<-,interactorListBase,list-method	interactors
interactors<-,interactorListBase,NULL-method	interactors
interactors<--methods	interactors
iValue,psimi25Attribute-method	psimi25Attribute-class
iValue<-,psimi25Attribute-method	psimi25Attribute-class
list2Matrix	list2Matrix
MATRIXDB.PSIMI25	BIOGRID.PSIMI25
members	complexName
members,psimi25Complex-method	psimi25Complex-class
MINT.PSIMI25	BIOGRID.PSIMI25
MIPS.PSIMI25	BIOGRID.PSIMI25
MPACT.PSIMI25	BIOGRID.PSIMI25
name,psimi25Attribute-method	psimi25Attribute-class
name<-,psimi25Attribute,ANY-method	psimi25Attribute-class
name<-,psimi25Attribute,character-method	psimi25Attribute-class
nameAc,psimi25Attribute-method	psimi25Attribute-class
nameAc<-,psimi25Attribute-method	psimi25Attribute-class
neutralComponent	bait
neutralComponent,psimi25Interaction-method	psimi25Interaction-class
null2na	null2na
numEdges,psimi25Hypergraph-method	psimi25Hypergraph-class
numInteractions	numInteractions-methods
numInteractions,psimi25InteractionEntry-method	numInteractions-methods
numInteractions-methods	numInteractions-methods
numInteractors	interactors
numInteractors,interactorListBase-method	interactors
numInteractors-methods	interactors
organismName	taxId-methods
organismName,organismTaxIdAndName-method	taxId-methods
organismName,psimi25Hypergraph-method	psimi25Hypergraph-class
organismName,psimi25InteractionEntry-method	psimi25InteractionEntry-class
organismName-methods	taxId-methods
organismName<-	taxId-methods
organismName<-,organismTaxIdAndName,character-method	taxId-methods
parsePsimi25Complex	parsePsimi25Interaction
parsePsimi25Interaction	parsePsimi25Interaction
participant	bait
participant,psimi25Interaction-method	psimi25Interaction-class
prey	bait
prey,psimi25Interaction-method	psimi25Interaction-class
psimi25Attribute-class	psimi25Attribute-class
psimi25Complex-class	psimi25Complex-class
psimi25ComplexEntry-class	psimi25ComplexEntry-class
psimi25Experiment-class	psimi25Experiment-class
psimi25Graph-class	psimi25Graph-class
psimi25Hypergraph-class	psimi25Hypergraph-class
psimi25Hypergraph2GraphNEL	psimi25Hypergraph2GraphNEL
psimi25Interaction-class	psimi25Interaction-class
psimi25InteractionEntry-class	psimi25InteractionEntry-class
psimi25Interactor-class	psimi25Interactor-class
psimi25Source-class	psimi25Source-class
psimi25XML2Graph	psimi25XML2Graph
pubmedID	bait
pubmedID,psimi25Interaction-method	psimi25Interaction-class
pubmedID,psimi25InteractionEntry-method	psimi25InteractionEntry-class
releaseDate	psimi25InteractionEntry-class
releaseDate,psimi25Entry-method	psimi25InteractionEntry-class
releaseDate-methods	psimi25InteractionEntry-class
revInciMat	psimi25Hypergraph-class
revInciMat,matrix-method	psimi25Hypergraph-class
separateXMLDataByExpt	separateXMLDataByExpt
show,pattributesListBase-method	psimi25Complex-class
show,psimi25Attribute-method	psimi25Attribute-class
show,psimi25AvailabilityType-method	psimi25Attribute-class
show,psimi25Complex-method	psimi25Complex-class
show,psimi25ComplexEntry-method	psimi25ComplexEntry-class
show,psimi25DbReferenceType-method	psimi25Attribute-class
show,psimi25Graph-method	psimi25Graph-class
show,psimi25Hypergraph-method	psimi25Hypergraph-class
show,psimi25Interaction-method	psimi25Interaction-class
show,psimi25InteractionEntry-method	psimi25InteractionEntry-class
show,psimi25Interactor-method	psimi25Interactor-class
show,psimi25NamesType-method	psimi25Attribute-class
sourceDb	sourceId-methods
sourceDb,psimi25Source-method	sourceId-methods
sourceDb,sourceDbAndId-method	sourceId-methods
sourceDb-methods	sourceId-methods
sourceDb<-	sourceId-methods
sourceDb<-,sourceDbAndId,character-method	sourceId-methods
sourceId	sourceId-methods
sourceId,sourceDbAndId-method	sourceId-methods
sourceId-methods	sourceId-methods
sourceId<-	sourceId-methods
sourceId<-,sourceDbAndId,character-method	sourceId-methods
taxId	taxId-methods
taxId,organismTaxIdAndName-method	taxId-methods
taxId,psimi25InteractionEntry-method	psimi25InteractionEntry-class
taxId-methods	taxId-methods
taxId<-	taxId-methods
taxId<-,organismTaxIdAndName,character-method	taxId-methods
translateID	translateID
translateID,list-method	translateID-methods
translateID,psimi25Graph-method	translateID-methods
translateID,psimi25Hypergraph-method	translateID-methods
translateID,psimi25Interactor-method	translateID-methods
translateID-methods	translateID-methods
uniprot	uniprot
uniprot,psimi25Interactor-method	uniprot-methods
uniprot,psimi25Source-method	psimi25Source-class
uniprot-methods	uniprot-methods
validatePSIMI25	validatePSIMI25
value<-,psimi25Attribute-method	psimi25Attribute-class
xref	availableXrefs
xref,psimi25CommonNameRef-method	psimi25Attribute-class
xref,psimi25Interactor-method	psimi25Interactor-class
