33d1f534a1111b27e0861428fb9c2e4c *DESCRIPTION
c237a1a159dfaadacc2bb090cf431280 *INDEX
296979eeb4379e4d227f3e420cfa9792 *Meta/Rd.rds
9d0dfdca201fcd2fd3ba3b7dbeb7aafb *Meta/data.rds
cd89bcda79cc772684f8165e20fea932 *Meta/hsearch.rds
cd4bf737523a8a5e300bd2b740c9c63c *Meta/links.rds
b8bc603ae1f51c9b42d37ad721fdb9d3 *Meta/nsInfo.rds
bc807cfbcb8c974fbcd71804f864ee84 *Meta/package.rds
636dacc6f05fb3d438e7acce929d4522 *Meta/vignette.rds
1caa345fcf65bcf42a4c6633f520b06b *NAMESPACE
240d28d145138a75831809e31a480bad *R/GWASTools
ed7529c89ecfbc3a0744de54cc3b61d2 *R/GWASTools.rdb
164d5f0c3c5bdec301ffd28ee82b36db *R/GWASTools.rdx
4a17bd862eefb22195861076a5992211 *data/HLA.hg18.RData
9281ae3bcdb734fe2eef3864fdf86537 *data/HLA.hg19.RData
be3415feeadb01dced4d9bccbdc27f7e *data/centromeres.hg18.RData
8c32910bfafa2a4aa98f67f00d97bb27 *data/centromeres.hg19.RData
3990f31a08539cbd910a9ca1a133614f *data/pseudoautosomal.hg18.RData
0f984d993efb69054643fb1b7ef1397b *data/pseudoautosomal.hg19.RData
18961c4ae51dd493fb7a17b490f430fa *data/relationsMeanVar.RData
094d95ecb8bc1d6e1e7ed62e7aff28db *doc/DataCleaning.R
e11d1bdd7e5fcdc84edd317074c4c914 *doc/DataCleaning.Rnw
039da5248b2bc47bbba25c66703cf9f1 *doc/DataCleaning.pdf
77d16747ffc9a55e4480ef3b555bfafb *doc/index.html
e598a929121610d8eba65979a31f91ee *help/AnIndex
286da081b3290b410113dc4883ae8a25 *help/GWASTools.rdb
b4fea8aba2f3bf6b5a10e1f25c495404 *help/GWASTools.rdx
19030e1deb77826534e50eec8bc6caec *help/aliases.rds
d4726eb320dd49dd9dae6bd76abce842 *help/paths.rds
2501033a9a87f39e5c1e76a93f9e7647 *html/00Index.html
444535b9cb76ddff1bab1e1865a3fb14 *html/R.css
d02cd0924aa1273786055eadee284eb6 *unitTests/BAFfromClusterMeans_test.R
c4d76587ac0adcccd53676a3d6a56e98 *unitTests/BAFfromGenotypes_test.R
a30f92dd6e0a00e7cb6a833a416e745d *unitTests/GenotypeData_test.R
c6f9428a027a52be005e5d7ecee983cb *unitTests/IntensityData_test.R
128c7369072ea96ed44ecb6a496a0917 *unitTests/MatrixGenotypeReader_test.R
9ccea588eadf2dc2efdf62e9e29486d7 *unitTests/NcdfGenotypeReader_test.R
fa559973b54d74e1066b436e2fb691f5 *unitTests/NcdfIntensityReader_test.R
47c7dc43aa5a421167ace27da45bdbb4 *unitTests/NcdfReader_test.R
67a1ce964be00d7180723bba030a3031 *unitTests/ScanAnnotationDataFrame_test.R
31212b6719dbe4e1556ea81d2dc3550d *unitTests/ScanAnnotationSQLite_test.R
9f19613050c5c0df376ef2a92d9a772a *unitTests/SnpAnnotationDataFrame_test.R
1a80659c616a9893e849e04c84cf5bb8 *unitTests/SnpAnnotationSQLite_test.R
d6b2af6d420d8648d72c49b6d589c0f4 *unitTests/alleleFrequency_test.R
8d89dc9ff9002416ca4cfcb4d072fc54 *unitTests/allequal_test.R
6715662c49ba1d68000f356d07f146b4 *unitTests/anomDetectBAF_test.R
dc188b62be9fa7f6cb0cb54f5ecff29b *unitTests/apartSnpSelection_test.R
2b4fa909cb3af9c59c1175b81372bf0c *unitTests/batchChisqTest_test.R
2b11287f53929e2c6cde5937bea0eb51 *unitTests/batchFisherTest_test.R
cae3ebaac778eaa716c296636159a639 *unitTests/chromIntensityPlot_test.R
455025b9f5aa6051cf84cb7f0ea01a5a *unitTests/convertNcdfGds_test.R
a4cc81f37e52f2194e3bf8c927d21525 *unitTests/duplicateDiscordanceAcrossDatasets_test.R
61f1cea9d8684b14875123e2dbcf8022 *unitTests/duplicateDiscordance_test.R
905598138226fdc90c7e5bd3f553c024 *unitTests/findBAFvariance_test.R
30a56126cc8657ec956f96c87da4177e *unitTests/getobj_test.R
f8a135a1fcf3c0f383a1e60670baa28e *unitTests/hetByScanChrom_test.R
5a9474736f609b96247bc0b0a61342d6 *unitTests/hetBySnpSex_test.R
0d7c0a72a92af6b3a3b91a5958cb6324 *unitTests/ibdPlot_test.R
ec756374cfe515504b4e3e4a2cc01d48 *unitTests/meanIntensityByScanChrom_test.R
41a5a01831ecd828cda4af98007c366e *unitTests/missingGenotypeByScanChrom_test.R
a3205fde64f25df663b03c972970a489 *unitTests/missingGenotypeBySnpSex_test.R
68d9419d296f7595d112f8bd3bacebe0 *unitTests/ncdfAddData_test.R
bc096c941f8988ada867da3569d0113b *unitTests/ncdfAddIntensity_test.R
a1c8356641bcd4f779689b5eeb96b5f2 *unitTests/ncdfCheckGenotype_test.R
e7b61a3490a9cefbe815328cd64c8d7f *unitTests/ncdfCheckIntensity_test.R
818c940bb80589e44e8e2684eba6f964 *unitTests/ncdfCreate_test.R
89684c1db692decdf16c3124a27b7686 *unitTests/ncdfSubset_test.R
e1e09a600d352c885b7bf32f9ed067e2 *unitTests/pseudoautoIntensityPlot_test.R
86e76d76ab0a662c41685d45623639b0 *unitTests/qualityScoreByScan_test.R
64a23402e8040c62d420a6205dbec0df *unitTests/qualityScoreBySnp_test.R
87cce94804e502b6ffda8222fbdf875a *unitTests/saveas_test.R
