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| DOSE-package | Disease Ontology Semantic and Enrichment analysis |
| DO2EG | Map DO term to entrez gene IDs |
| DOParams | Methods for calculating semantic similarity |
| DOParams-class | Class "DOParams" |
| DOSE | Disease Ontology Semantic and Enrichment analysis |
| EG2DO | Map entrez gene ID to DO terms |
| enrichDO | DO Enrichment Analysis of a gene set. |
| enrichDOResult-class | Class "enrichDOResult" |
| IC | Information content of DO terms |
| Info_Contents_human_DO | Information content of DO terms |
| show-method | Class "enrichDOResult" |
| sim | Methods for calculating semantic similarity |
| sim-method | Methods for calculating semantic similarity |
| sim-methods | Methods for calculating semantic similarity |
| summary-method | Class "enrichDOResult" |