import("graph", "RBGL")

export("checkSignals",
	"CNORwrap",
	"compressModel",
	"cutAndPlotResultsT1", 
       "cutNONC",
       "expandGates",
       "findNONC",
       "gaBinaryT1",
       "getFit",
       "indexFinder",
       "makeCNOlist",
       "normaliseCNOlist",
       "plotCNOlist",
       "plotCNOlistLarge",
       "plotCNOlistLargePDF",
       "plotCNOlistPDF",
       "plotFit",
       "plotOptimResults",
       "plotOptimResultsPDF",
       "prep4Sim",
       "readMIDAS",
	"readSif",
	"residualError",
	"simulateT1",
       "simulatorT1",
       "writeDot",
       "writeNetwork",
       "writeReport",
       "writeScaffold")