A set of annotation maps for reactome

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Documentation for package ‘reactome.db’ version 1.0.36

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reactome Bioconductor annotation data package
reactome.db Bioconductor annotation data package
reactomeEXTID2PATHID An annotation data object that maps Entrez Gene identifiers to Reactome pathway identifiers
reactomeGO2REACTOMEID An annotation data object that maps Gene Ontology (GO) identifiers to Reactome database identifiers
reactomeMAPCOUNTS Number of mapped keys for the maps in package reactome.db
reactomePATHID2EXTID An annotation data object that maps Reactome pathway identifiers to Entrez Gene identifiers.
reactomePATHID2NAME An annotation data object that maps Reactome pathway identifiers to Reactome pathway names
reactomePATHNAME2ID An annotation data object that maps Reactome pathway names to identifiers for the corresponding pathway names used by Reactome
reactomeREACTOMEID2GO An annotation data object that maps Reactome database identifiers to Gene Ontology identifiers
reactome_dbconn Collect information about the package annotation DB
reactome_dbfile Collect information about the package annotation DB
reactome_dbInfo Collect information about the package annotation DB
reactome_dbschema Collect information about the package annotation DB