Affymetrix celegans annotation data (chip celegans)

[Up] [Top]

Documentation for package ‘celegans.db’ version 2.5.0

Help Pages

celegans Bioconductor annotation data package
celegans.db Bioconductor annotation data package
celegansACCNUM Map Manufacturer identifiers to Accession Numbers
celegansALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
celegansCHR Map Manufacturer IDs to Chromosomes
celegansCHRLENGTHS A named vector for the length of each of the chromosomes
celegansCHRLOC Map Manufacturer IDs to Chromosomal Location
celegansCHRLOCEND Map Manufacturer IDs to Chromosomal Location
celegansENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
celegansENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
celegansENTREZID Map between Manufacturer Identifiers and Entrez Gene
celegansENZYME Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
celegansENZYME2PROBE Map between Enzyme Commission Numbers and Manufacturer Identifiers
celegansGENENAME Map between Manufacturer IDs and Genes
celegansGO Map between Manufacturer IDs and Gene Ontology (GO)
celegansGO2ALLPROBES Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
celegansGO2PROBE Map between Gene Ontology (GO) and Manufacturer Identifiers
celegansLOCUSID Map between Manufacturer Identifiers and Entrez Gene
celegansMAPCOUNTS Number of mapped keys for the maps in package celegans.db
celegansORGANISM The Organism information for celegans
celegansORGPKG The Organism information for celegans
celegansPATH Mappings between probe identifiers and KEGG pathway identifiers
celegansPATH2PROBE Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
celegansPMID Map between Manufacturer Identifiers and PubMed Identifiers
celegansPMID2PROBE Map between PubMed Identifiers and Manufacturer Identifiers
celegansREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
celegansSYMBOL Map between Manufacturer Identifiers and Gene Symbols
celegansUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
celegansUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
celegansUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
celegansWORMBASE Map Wormbase accession numbers with Entrez Gene identifiers
celegansWORMBASE2PROBE Map Wormbase accession numbers with Entrez Gene identifiers
celegans_dbconn Collect information about the package annotation DB
celegans_dbfile Collect information about the package annotation DB
celegans_dbInfo Collect information about the package annotation DB
celegans_dbschema Collect information about the package annotation DB