IlluminaHumanMethylation450k.db
                        Bioconductor annotation data package
IlluminaHumanMethylation450kACCNUM
                        Map Manufacturer identifiers to Accession
                        Numbers
IlluminaHumanMethylation450kALIAS2PROBE
                        Map between Common Gene Symbol Identifiers and
                        Manufacturer Identifiers
IlluminaHumanMethylation450kBLAME
                        Who checked the latest build of these
                        annotations into version control?
IlluminaHumanMethylation450kBUILD
                        Divulge the GoldenPath genome build ID for
                        these annotations.
IlluminaHumanMethylation450kCHR
                        Map Manufacturer IDs to Chromosomes
IlluminaHumanMethylation450kCHR36
                        Chromosome annotations against genome build 36
IlluminaHumanMethylation450kCHR37
                        Chromosome annotations against genome build 37
IlluminaHumanMethylation450kCHRLENGTHS
                        A named vector for the length of each of the
                        chromosomes
IlluminaHumanMethylation450kCHRLOC
                        Map Manufacturer IDs to Chromosomal Location
IlluminaHumanMethylation450kCOLORCHANNEL
                        Color Channel for locus assay
IlluminaHumanMethylation450kCPG36
                        CpG location annotations against genome build
                        36
IlluminaHumanMethylation450kCPG37
                        CpG location annotations against genome build
                        37
IlluminaHumanMethylation450kCPGCOORDINATE
                        Map Manufacturer IDs to genomic coordinate
IlluminaHumanMethylation450kCPGILOCATION
                        Map Illumina probeIDs to the the nearest UCSC
                        CpG island, if any
IlluminaHumanMethylation450kCPGINAME
                        Map Illumina probeIDs to the the nearest UCSC
                        CpG island, if any
IlluminaHumanMethylation450kCPGIRELATION
                        Map Illumina probeIDs to the the nearest UCSC
                        CpG island, if any
IlluminaHumanMethylation450kCPGS
                        Number of CpG dinucleotides in target genomic
                        sequence
IlluminaHumanMethylation450kDESIGN
                        Probe design type for HumanMethylation450k
                        arrays
IlluminaHumanMethylation450kDHS
                        Is the probe targeted at a DNAse hypersensitive
                        site in the genome?
IlluminaHumanMethylation450kDMR
                        Is the probe targeted at a differentially
                        methylated region?  What sort?
IlluminaHumanMethylation450kENHANCER
                        Is the probe associated with an enhancer
                        binding site?
IlluminaHumanMethylation450kENSEMBL
                        Map Ensembl gene accession numbers with Entrez
                        Gene identifiers
IlluminaHumanMethylation450kENTREZID
                        Map between Manufacturer Identifiers and Entrez
                        Gene
IlluminaHumanMethylation450kENZYME
                        Map between Manufacturer IDs and Enzyme
                        Commission (EC) Numbers
IlluminaHumanMethylation450kENZYME2PROBE
                        Map between Enzyme Commission Numbers and
                        Manufacturer Identifiers
IlluminaHumanMethylation450kFANTOM
                        Is the probe associated with an enhancer
                        binding site?
IlluminaHumanMethylation450kGENENAME
                        Map between Manufacturer IDs and Genes
IlluminaHumanMethylation450kGO
                        Map between Manufacturer IDs and Gene Ontology
                        (GO)
IlluminaHumanMethylation450kGO2ALLPROBES
                        Map between Gene Ontology (GO) Identifiers and
                        all Manufacturer Identifiers in the subtree
IlluminaHumanMethylation450kGO2PROBE
                        Map between Gene Ontology (GO) and Manufacturer
                        Identifiers
IlluminaHumanMethylation450kISCPGISLAND
                        Determine whether a probe is within a CpG
                        island
IlluminaHumanMethylation450kMAP
                        Map between Manufacturer Identifiers and
                        cytogenetic maps/bands
IlluminaHumanMethylation450kMAPCOUNTS
                        Number of mapped keys for the maps in package
                        IlluminaHumanMethylation450k.db
IlluminaHumanMethylation450kMETHYL27
                        Determine whether a probe is also found on the
                        27k chip
IlluminaHumanMethylation450kNUID
                        Map Illumina probe IDs to the NuID
                        representation of the target sequence
IlluminaHumanMethylation450kOMIM
                        Map between Manufacturer Identifiers and
                        Mendelian Inheritance in Man (MIM) identifiers
IlluminaHumanMethylation450kORGANISM
                        The Organism information for
                        IlluminaHumanMethylation450k
IlluminaHumanMethylation450kPATH
                        Mappings between probe identifiers and KEGG
                        pathway identifiers
IlluminaHumanMethylation450kPATH2PROBE
                        Map between Kyoto Encyclopedia of Genes and
                        Genomes (KEGG) pathway identifiers and
                        Manufacturer Identifiers
IlluminaHumanMethylation450kPFAM
                        Map Manufacturer IDs to Pfam IDs
IlluminaHumanMethylation450kPMID
                        Map between Manufacturer Identifiers and PubMed
                        Identifiers
IlluminaHumanMethylation450kPMID2PROBE
                        Map between PubMed Identifiers and Manufacturer
                        Identifiers
IlluminaHumanMethylation450kPROBELOCATION
                        Map Illumina probe IDs to the location of the
                        target sequence
IlluminaHumanMethylation450kPROSITE
                        Map Manufacturer IDs to PROSITE ID
IlluminaHumanMethylation450kRANDOM
                        Determine whether a probe was randomly selected
                        in the design phase.
IlluminaHumanMethylation450kREFSEQ
                        Map between Manufacturer Identifiers and RefSeq
                        Identifiers
IlluminaHumanMethylation450kREGULATORYGROUP
                        Map Illumina probeIDs to the the nearest UCSC
                        regulatory feature, if any
IlluminaHumanMethylation450kREGULATORYLOCATION
                        Map Illumina probeIDs to the the nearest UCSC
                        regulatory feature, if any
IlluminaHumanMethylation450kREGULATORYNAME
                        Map Illumina probeIDs to the the nearest UCSC
                        regulatory feature, if any
IlluminaHumanMethylation450kSVNID
                        What is the in-house Subversion ID of this
                        annotation package?
IlluminaHumanMethylation450kSYMBOL
                        Map between Manufacturer Identifiers and Gene
                        Symbols
IlluminaHumanMethylation450kUNIGENE
                        Map between Manufacturer Identifiers and
                        UniGene cluster identifiers
IlluminaHumanMethylation450kUNIPROT
                        Map Uniprot accession numbers with Entrez Gene
                        identifiers
IlluminaHumanMethylation450k_dbconn
                        Collect information about the package
                        annotation DB
IlluminaHumanMethylation450k_get27k
                        Retrieve 27k probe IDs by design and/or color
                        channel for processing
IlluminaHumanMethylation450k_getControls
                        Retrieve control probe addresses, optionally by
                        control probe type
IlluminaHumanMethylation450k_getProbeOrdering
                        Retrieve probe IDs in the order loaded from the
                        manifest
IlluminaHumanMethylation450k_getProbes
                        Retrieve probe addresses by design and/or color
                        channel for processing
