Package: GGtools
Title: software and data for genetics of gene expression (c) 2006 VJ
        Carey
Version: 3.10.2
Author: Vince Carey <stvjc@channing.harvard.edu>
Description: dealing with hapmap SNP reports, GWAS, etc.
Depends: R (>= 2.7.0), methods, Biobase (>= 1.11.26), GGBase (>=
        3.7.5), snpStats(>= 1.1.10), annotate, IRanges, rtracklayer,
        org.Hs.eg.db, GenomicRanges (>= 1.3.38), ff
Suggests: illuminaHumanv1.db, org.Hs.eg.db,
        SNPlocs.Hsapiens.dbSNP.20100427, rpart, rtracklayer, GSEABase,
        ceu1kg, ceuhm3, SNPlocs.Hsapiens.dbSNP.20090506, genefilter,
        hmyriB36
LazyData: no
biocViews: SNP, GeneticVariability, Genetics, Bioinformatics
Maintainer: Vince Carey <stvjc@channing.harvard.edu>
Imports: AnnotationDbi, IRanges (>= 1.1.6), annaffy, GSEABase,
        rtracklayer
Enhances: multicore, Rsamtools
License: Artistic-2.0
Collate: allS4.R X2chunk.R cisSnpTests.R geneTrack.R multff.R
        topFeats.R filterCode.R gwSnpScreen.R newEQTL.R topSnps.R
        bestCis.R geneRanges.R minp.R snp130locs.R trackSet.R permEx.R
        vcfutils.R snp.rhs.testsMACH.R shiftRight.R exome_minp.R
        scoresInRanges.R fullsynth.R clipPCs.R pcc.R interleave2cis.R
        transTops.R feqtltests.R externalize.R egtset.R relocate.R
        sumDirectors.R getTransScores.R
Packaged: 2011-08-25 17:23:02 UTC; biocbuild
Built: R 2.13.1; ; 2011-08-25 23:13:48 UTC; windows
