AN.test                 Performs the Adaptive Neyman test of Fan and
                        Lin (1998)
BS.test                 Performs the test of Bai and Saranadasa (1996)
annLoi2008              Annotation data used in the DEGraph package
                        vignette
classLoi2008            Tamoxifen treatment resistance status data used
                        in the DEGraph package vignette
exprLoi2008             Gene expression data used in the DEGraph
                        package vignette
getConnectedComponentList
                        Given a graph, returns a list of its connected
                        components (which are also graph objects),
                        ordered by decreasing number of nodes
getKEGGPathways         Builds a graph for each of the KEGG pathways
getSignedGraph          Given a graph, builds a signed version of the
                        adjacency matrix taking into account the type
                        of interaction (e.g., activation or inhibition)
grListKEGG              KEGG networks used in the DEGraph package
                        vignette
graph.T2.test           Performs the Hotelling T2 test in Fourier space
hyper.test              Performs an hypergeometric test of enrichment
                        of a set of hypotheses in significant elements
is.NCIgraph             Assess whether a graph is a NCI graph
laplacianFromA          Calculates the Laplacian associated to an
                        adjacency matrix
plotValuedGraph         Plots a graph with nodes colored according to a
                        quantitative variable
randomWAMGraph          Generates a random graph
testOneConnectedComponent
                        Applies a series of two-sample tests to a
                        connected graph using various statistics
testOneGraph            Applies a serie of two-sample tests to each
                        connected component of a graph using various
                        statistics
twoSampleFromGraph      Given a basis (typically the eigenvectors of a
                        graph Laplacian), builds two multivariate
                        normal samples with mean shift located in the
                        first elements of the basis
writeAdjacencyMatrix2KGML
                        Writes an adjacency matrix into an XML file
