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| iSeq1 | Bayesian modeling of ChIP-seq data through hidden Ising models |
| iSeq2 | Bayesian hierarchical modeling of ChIP-seq data through hidden Ising |
| mergetag | Aggregate sequence tags into genomic windows/bins and count the number |
| nrsf | nrsf data |
| peakreg | Call and merge enriched genomic windows/bins. |
| plotreg | A function used to plot enriched genomic regions |