# GGexplorer.org: interface to HapMap SNP/expression data

### New features!

- Substrings of KEGG pathway names can be given on the pathway query page; all matching pathways will be listed; all genes within a selected pathway are then listed as well. Graphics and additional annotation support forthcoming...
- An RDF representation of the top SNP list with p-values can be retrieved (see link next to TEXT on file report page.

### This web service provides access to data and analysis tools described in these publications (click images for pubmed links):

###

Read the overview

Access the basic query page (you specify gene and chromosome)

Access the pathway query page (you specify a regular expression with which KEGG pathway names are searched; after selecting a pathway, you obtain a list of member genes)

Creation of this service was made possible in part by a grant from NIH NHGRI (P41 HG004059, R. Gentleman, FHCRC, PI).

Acknowledgements: We thank the Computational Biology and Health Sciences Computing groups at Fred Hutchinson Cancer Research Center for providing the server and administrative support.

Powered by R (www.r-project.org), CGIwithR (David Firth/Duncan Temple Lang, cran.r-project.org), and Bioconductor (www.bioconductor.org).

R and CGI programming by B.J. Harshfield and V. Carey.

Comments to stvjc at channing dot harvard dot edu.