Illumina Illumina Human Methylation 27k annotation data (chip IlluminaHumanMethylation27k)

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Documentation for package ‘IlluminaHumanMethylation27k.db’ version 1.2.0

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IlluminaHumanMethylation27k Bioconductor annotation data package
IlluminaHumanMethylation27k.db Bioconductor annotation data package
IlluminaHumanMethylation27kACCNUM Map Manufacturer identifiers to Accession Numbers
IlluminaHumanMethylation27kALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
IlluminaHumanMethylation27kCHR Map Manufacturer IDs to Chromosomes
IlluminaHumanMethylation27kCHRLENGTHS A named vector for the length of each of the chromosomes
IlluminaHumanMethylation27kCHRLOC Map Manufacturer IDs to Chromosomal Location
IlluminaHumanMethylation27kCHRLOCEND Map Manufacturer IDs to Chromosomal Location
IlluminaHumanMethylation27kCPGCOORDINATE Map Manufacturer IDs to genomic coordinate
IlluminaHumanMethylation27kDISTTOTSS Map Manufacturer IDs to the distance to the transcript start of the nearest gene
IlluminaHumanMethylation27kENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
IlluminaHumanMethylation27kENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
IlluminaHumanMethylation27kENTREZID Map between Manufacturer Identifiers and Entrez Gene
IlluminaHumanMethylation27kENZYME Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
IlluminaHumanMethylation27kENZYME2PROBE Map between Enzyme Commission Numbers and Manufacturer Identifiers
IlluminaHumanMethylation27kGENENAME Map between Manufacturer IDs and Genes
IlluminaHumanMethylation27kGO Map between Manufacturer IDs and Gene Ontology (GO)
IlluminaHumanMethylation27kGO2ALLPROBES Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
IlluminaHumanMethylation27kGO2PROBE Map between Gene Ontology (GO) and Manufacturer Identifiers
IlluminaHumanMethylation27kISCPGISLAND Determine whether a probe is within a CpG island
IlluminaHumanMethylation27kLOCUSID Map between Manufacturer Identifiers and Entrez Gene
IlluminaHumanMethylation27kMAP Map between Manufacturer Identifiers and cytogenetic maps/bands
IlluminaHumanMethylation27kMAPCOUNTS Number of mapped keys for the maps in package IlluminaHumanMethylation27k.db
IlluminaHumanMethylation27kOMIM Map between Manufacturer Identifiers and Mendelian Inheritance in Man (MIM) identifiers
IlluminaHumanMethylation27kORGANISM The Organism information for IlluminaHumanMethylation27k
IlluminaHumanMethylation27kORGPKG The Organism information for IlluminaHumanMethylation27k
IlluminaHumanMethylation27kPATH Mappings between probe identifiers and KEGG pathway identifiers
IlluminaHumanMethylation27kPATH2PROBE Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
IlluminaHumanMethylation27kPFAM Map Manufacturer IDs to Pfam IDs
IlluminaHumanMethylation27kPMID Map between Manufacturer Identifiers and PubMed Identifiers
IlluminaHumanMethylation27kPMID2PROBE Map between PubMed Identifiers and Manufacturer Identifiers
IlluminaHumanMethylation27kPROSITE Map Manufacturer IDs to PROSITE ID
IlluminaHumanMethylation27kREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
IlluminaHumanMethylation27kSYMBOL Map between Manufacturer Identifiers and Gene Symbols
IlluminaHumanMethylation27kUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
IlluminaHumanMethylation27kUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
IlluminaHumanMethylation27kUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
IlluminaHumanMethylation27k_dbconn Collect information about the package annotation DB
IlluminaHumanMethylation27k_dbfile Collect information about the package annotation DB
IlluminaHumanMethylation27k_dbInfo Collect information about the package annotation DB
IlluminaHumanMethylation27k_dbschema Collect information about the package annotation DB