YAQCStats-class         Class "YAQCStats"
YaqcControlProbes-class
                        Class "YaqcControlProbes"
bio-methods             Returns the 'bio' hybridization probes of
                        YaqcControlProbes or YaqcBioProbes objects.
deg-methods             Returns the degradation probes of
                        YaqcControlProbes or YaqcDegProbes objects.
getAllInt               Get the summerized MAS5 values for a given
                        spike probe
getBioProbes            Get the names of the Bio spike probes on the
                        array
getOutliers             Get outliers for the different YAQCStatsObject
                        slots
getQCRatios             Compute qc probe ratios using GCOS intensity
                        values
getRatioProbes          Get the names of degradation control probes on
                        the array
getSpikeProbes          Get the names of all spike probes on the array
moreSpikeInProbes       Accessor Methods for YAQCStats class
probeSelectionInterface
                        Tcltk Interface to Generate an Instance of
                        YaqcControlProbes for a given Chip Set
reprodPlot              Plot human whole genome GeneChips
                        reproductibility
spk-methods             Returns the labelling probes of
                        YaqcControlProbes or YaqcSpkProbes objects.
yaqc-methods            Create an YAQCStat object
yaqc.affy               Generate QC Stats from an AffyBatch Object
yaqc.plot               Plots a YAQCStats object
yaqc.summary            Summarizes YAQCStats object outliers
