Package: topGO
Type: Package
Title: topGO: Enrichment analysis for Gene Ontology
Version: 1.16.2
Date: 2009-04-04
Author: Adrian Alexa, Jorg Rahnenfuhrer
Maintainer: Adrian Alexa <alexa@mpi-inf.mpg.de>
Description: topGO package provides tools for testing GO terms while
        accounting for the topology of the GO graph. Different test
        statistics and different methods for eliminating local
        similarities and dependencies between GO terms can be
        implemented and applied.
License: LGPL
Depends: R (>= 2.10.0), methods, graph (>= 1.14.0), Biobase (>= 2.0.0),
        GO.db (>= 2.3.0), AnnotationDbi (>= 1.7.19), SparseM (>= 0.73)
Imports: methods, graph, Biobase, SparseM, AnnotationDbi, lattice
Suggests: ALL, hgu95av2.db, hgu133a.db, genefilter, xtable, multtest,
        Rgraphviz, globaltest
biocViews: Microarray,Bioinformatics,Visualization
Collate: AllClasses.R topGOmethods.R topGOgraph.R topGOalgo.R
        topGOfunctions.R topGOannotations.R topGOtests.R topGOviz.R
        zzz.R
Packaged: 2010-06-04 21:01:20 UTC; biocbuild
Built: R 2.11.0; ; 2010-06-05 02:49:29 UTC; windows
