2afd3d421a421f9a2c97f8dcbe1d7bde *DESCRIPTION
4b3f5fe2114f638059864f5be3f21f39 *INDEX
c0ebb85df76e9b7da52a0cf06c2b2f5f *Meta/Rd.rds
0381c2090c6b942816a5f718c529484d *Meta/data.rds
d7a914110cabf2e290b64bc6a818fb68 *Meta/hsearch.rds
afc0b31e459099184e911538f9e900ff *Meta/links.rds
383c514a0b095f512b510057243d4579 *Meta/nsInfo.rds
e157630223355b2797def6d08a8b2b80 *Meta/package.rds
039471d3d64077ba778536f793ed97fa *Meta/vignette.rds
4216e73c58389ef7d27eb9c20017da3c *NAMESPACE
f07d3015c4220dea7a7be8c741d2985b *R/chipseq
73752f47ac9302416c00c19637fb6851 *R/chipseq.rdb
ac684e28089290042c3f58e8c8857cd2 *R/chipseq.rdx
c67ac49dbe2a5c389a1b642feed5cbc9 *Scripts/AntibodyComparison.Rnw
630a273418c2f9ea72fc5134e7ec70dd *Scripts/CTCFBindingSites.R
ca9cf8135dd0e90c84a79c7d25b67f8e *Scripts/CTCF_ERV.R
aee97330bc6fc5325ce931bed2ce78db *Scripts/CopyNumber.Rnw
b9fdf9ddd9d25837d91b84181d44a947 *Scripts/Islands.Rnw
d3e0e7d6d67905e3f34b7b3115d6729a *Scripts/MyoD.R
70ed9c49dec4afdb22fde785402b70ba *Scripts/PairedEndComparison.Rnw
dcb4e37001f03145920d1c8ff3117e0f *Scripts/PeakContextHuman.Rnw
e22d7dbd060325161369d0e7e2e58809 *Scripts/PeakContextMouse.Rnw
bf012dbfcfee1aee1d476b131ff815b6 *Scripts/PeakCutoff.Rnw
027314cba8b874dc1d337a24048faf6a *Scripts/PeakModel.Rnw
10a39afb911fbcfd768ce3f473074e6e *Scripts/PeakReproducibility.Rnw
fc5f8df77609407d4dde159745ead9de *Scripts/PeaksByCopyNumber.Rnw
727166198a38cc8d25d326ca1eb40ec4 *Scripts/RateComparison.Rnw
aa70f1fa6f051112a2d02f42a95ce676 *Scripts/ReadAndSave54.R
ae7894a5b856dbaf4eb47efb18a37aaa *Scripts/ReadAndSaveCTCF.R
42e617263ffdc34e7ca72e2812520574 *Scripts/ReadAndSaveData.R
05caa000363574dcdbb4f33f43adc444 *Scripts/ReadAndSaveSimulation.R
0499bfe7ca2da5b930300dcea653fe3f *Scripts/SolexaSim.R
8418412635db910c56247de35566e5e9 *Scripts/abc.rda
26650b47f9d37553f15f5ef36ed49aa2 *Scripts/antibody_comparison.R
ed4f51f8bcebaf4eeeb5c96ff4879c24 *Scripts/dePeaks.R
7ff957045db2e1d065575f81aeba1750 *Scripts/diffpeak.R
2410eee3a730f6789a827dbe40cb7db4 *Scripts/diffpeaks.R
837228bc953727b032e40cbb6205a57d *Scripts/estimate_fragment_size.R
56f83b791d14de2be27ba0f5bbc369c5 *Scripts/fibroblasts.R
e72faaaedf165cab4014877a5c052884 *Scripts/getIsochores.R
3783000fdd3bf5e218849c3c4f13125f *Scripts/hmm.R
4b7c58b557ccce7b42ccc011b4d82021 *Scripts/human-islands.R
d56650d153d47f58f499be89cb3af9a9 *Scripts/isochore_comparison.R
f7328263dd15bd2151f28b1608cbbb49 *Scripts/isochores.mm9.rda
c7a667f5161cfde7f01daaa6d4caa464 *Scripts/negbinomial.R
7a9edca21dc2d15e4de03a4a04675d1d *Scripts/peakContext.R
786298cc4d4d8d7fba7ac8a3cdf3bdc5 *Scripts/peak_mle.R
e14f736999fe4d70f015fb4d4e39ba68 *Scripts/poisson.R
2d307d1468ebac6eea2f052f07bb4e30 *Scripts/simulate.R
bf32b8fbb5ae9f6aca83195bf78deae3 *Scripts/singletons.Rnw
41c6ab6fd784ed7445193929413afc97 *Scripts/solexa54.R
ba7f25a60a100c51de70f699f03b4eaa *data/Rdata.zip
46de3a9b99e861907f61d64ba6e5c1fe *data/filelist
f1ca1c04f30a430ca3f3023f0d01c6a3 *doc/Workflow.R
fa4bb3487712c7f452406416ba07861f *doc/Workflow.Rnw
d18843f70227ce4b8ee0559444ba2ccb *doc/Workflow.pdf
3e2f9090fab707fd7981b4265133832b *doc/index.html
16fc17d41397ba116c8822c29691a111 *help/AnIndex
11280a21d7353c95fb950617f0fad7e9 *help/aliases.rds
eb9ed2841a896fccbdb771eb43a0b7bd *help/chipseq.rdb
773c863652acad393be3793417dff6c7 *help/chipseq.rdx
f851e7a3c6c804c75d71e67e40081f64 *help/paths.rds
22aa6da830896b5699f67d741047e8eb *html/00Index.html
ee317fd8128268ba18363361a2912ec3 *libs/x64/chipseq.dll
