convertAAP-package	convertAAP.package
convert_amino-package	convert_amino.package
add_pseudo_counts	add_pseudo_counts
amino_counts	amino_counts
average_cols_aap	average_cols_aap
bgafun	bgafun
calculate_pseudo	calculate_pseudo
Calculate_Row_Weights	Calculate_Row_Weights
convertAAP	convertAAP.package
convert_aln_AAP	convert_aln_AAP
convert_aln_amino	convert_aln_amino
convert_seq_AAP	convert_seq_AAP
convert_seq_amino	convert_seq_amino
create_colnames_AAP	create_colnames_AAP
create_colnames_amino	create_colnames_amino
create_probab	create_probab
create_profile	create_profile
create_profile_strings	create_profile_strings
Henikoff_weights	Henikoff_weights
LDH	LDH
LDH.aap	LDH.aap
LDH.aap.ave	LDH.aap.ave
LDH.amino	LDH.amino
LDH.amino.gapless	LDH.amino.gapless
LDH.amino.pseudo	LDH.amino.pseudo
LDH.groups	LDH.groups
pseudo_counts	pseudo_counts
remove_gaps	remove_gaps
remove_gaps_groups	remove_gaps_groups
run_between_pca	run_between_pca
sum_20_aln	sum_20_aln
sum_20_cols	sum_20_cols
sum_aln	sum_aln
top_residues_2_groups	top_residues_2_groups
Weight_Amino	Weight_Amino
