SpeCond                 The condition-specific detection function
createParameterMatrix   Create or Modify the SpeCond argument
                        parameters
expSetSpeCondExample    An ExpressionSet example object used in the
                        SpeCond package
expressionSpeCondExample
                        The expression matrix example used in the
                        SpeCond package
fitNoPriorWithExclusion
                        Fit the expression values profile with a
                        mixture of normal components ignoring outliers
fitPrior                Fit the expression value profiles with a
                        mixture of normal components
getDefaultParameter     Get the default parameter to use SpeCond
                        function
getFullHtmlSpeCondResult
                        Visualisation function of the SpeCond analysis
                        results
getGeneHtmlPage         Visualise for each gene the condition-specific
                        detection result from SpeCond
getMatrixFromExpressionSet
                        Obtain the expression matrix from an
                        ExpressionSet object
getProfile              Create the condition-specific profile of
                        specific matrix result from SpeCond
getSpecificOutliersStep1
                        Detect the condition-specific as outliers in
                        for the first step on the SpeCond procedure
getSpecificResult       Detect the condition-specific genes for the
                        second step on the SpeCond procedure
simulatedSpeCondData    An example of simulated expression matrix used
                        in the SpeCond package
writeGeneResult         Write a condition-specific analysis result text
                        file
writeSpeCondResult      Write in text files the main result of the
                        SpeCond function
writeUniqueProfileSpecificResult
                        Write the specific profiles from the SpeCond
                        analysis
