Package: ChIPpeakAnno
Type: Package
Title: Batch annotation of the peaks identified from either ChIP-seq or
        ChIP-chip experiments.
Version: 1.4.2
Date: 2009-07-30
Author: Lihua Julie Zhu, Herve Pages, Claude Gazin, Nathan Lawson,Simon
        Lin, David Lapointe and Michael Green
Maintainer: Lihua Julie Zhu <julie.zhu@umassmed.edu>
Depends: biomaRt, multtest, IRanges, Biostrings,
        BSgenome,BSgenome.Ecoli.NCBI.20080805, GO.db,org.Hs.eg.db,limma
Imports: biomaRt, multtest, IRanges, Biostrings, BSgenome, GO.db,limma
biocViews: Annotation, ChIPseq, ChIPchip
Description: The package includes functions to retrieve the sequences
        around the peak, obtain enriched Gene Ontology (GO) terms, find
        the nearest gene, exon, miRNA or custom features such as most
        conserved elements and other transcription factor binding sites
        supplied by users. This package leverages the biomaRt, IRanges,
        Biostrings, BSgenome, GO.db, multtest and stat packages
License: GPL (>= 2)
LazyLoad: no
Packaged: 2010-09-06 22:05:34 UTC; biocbuild
Built: R 2.11.1; ; 2010-09-07 02:39:36 UTC; windows
