data provided by UCSC for Cd4 raw measures of DnaseI hypersensitivity

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Documentation for package ‘encoDnaseI’ version 0.1-0

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ALICOR aligned and interpolated correlation for local maximum traces for two scatterplots
alicor aligned and interpolated correlation for local maximum traces for two scatterplots
chrnum Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
chrnum,hg18track-method Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
chrnum,numeric-method Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
chrnum-class Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
chromStarts Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
chromStarts,hg18track-method Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
clipTrk Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
clipTrk,hg18track,numeric,numeric,ANY-method Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
dataVals Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
dataVals,hg18track-method Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
demoPGM1ssr aligned and interpolated correlation for local maximum traces for two scatterplots
demoTrk19 Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
getTrkXY Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
getTrkXY,hg18track,character-method Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
getTrkXY,hg18track,missing-method Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
hg18track-class Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
initialize,hg18track-method Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
juxtaPlot two-panel plot with track info and snp screen t-values
locmax aligned and interpolated correlation for local maximum traces for two scatterplots
makeHg18track Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
rangeLocs Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
rangeLocs,hg18track-method Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
rawCD4 A data frame with information on the UCSC browser track related to DNaseI hypersensitivity
rawCd4DnaseI A data frame with information on the UCSC browser track related to DNaseI hypersensitivity
rawHelaDnaseI A data frame with information on the UCSC browser track related to DNaseI hypersensitivity
WRC aligned and interpolated correlation for local maximum traces for two scatterplots
wrc aligned and interpolated correlation for local maximum traces for two scatterplots
[,hg18track-method Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.