gnfCerebHi            package:MAQCsubset            R Documentation

_G_e_n_e _l_i_s_t_s _f_o_r _h_i _o_r _l_o_w _a_b_u_n_d_a_n_c_e _i_n _c_e_r_e_b_e_l_l_u_m _a_c_c_o_r_d_i_n_g
_t_o _N_o_v_a_r_t_i_s _G_N_F _s_y_m_a_t_l_a_s

_D_e_s_c_r_i_p_t_i_o_n:

     Data frames with gene lists for hi or low abundance in cerebellum
     according to Novartis GNF symatlas

_U_s_a_g_e:

     data(gnfCerebHi)
     data(gnfCerebLow)

_D_e_t_a_i_l_s:

     The  symatlas.gnf.org database was searched using the gcrma
     version of human gene atlas for genes having expression in
     cerebellum  at least 3 times (or at most 1/3 times) median
     expression over all organs surveyed.  The resulting gene lists
     were intersected with genes present on GE codelink (version used
     in MAQCsubset) and hgu95a.

_V_a_l_u_e:

     data.frame instances with columns providing gene name, affy probe
     set identifier, codelink probe identifier, illuminaHumanv1
     identifier.

_A_u_t_h_o_r(_s):

     Vince Carey <stvjc@channing.harvard.edu>

_E_x_a_m_p_l_e_s:

     data(gnfCerebHi)
     gnfCerebHi[1:3,]

