\HeaderA{MAQCsubset}{Experimental Data Package: MAQCsubset}{MAQCsubset}
\aliasA{afxsub}{MAQCsubset}{afxsub}
\aliasA{afxsubRMA}{MAQCsubset}{afxsubRMA}
\aliasA{afxsubRMAES}{MAQCsubset}{afxsubRMAES}
\aliasA{ilmMAQCsubR}{MAQCsubset}{ilmMAQCsubR}
\keyword{datasets}{MAQCsubset}
\begin{Description}\relax
selected data from the MAQC project (Nature Biotechnology, Sept. 2006)
\end{Description}
\begin{Usage}
\begin{verbatim}
data(afxsubRMAES)
data(afxsubRMA)
data(afxsub)
\end{verbatim}
\end{Usage}
\begin{Format}\relax
The format is:
An \code{ExpressionSetObject} with covariates:
\Itemize{
\item \code{site}: from cel
\item \code{samp}: rna src/mixture code
\item \code{repl}: replicate
}
\end{Format}
\begin{Note}\relax
\code{afxsubRMA} is an \code{exprSet} (deprecated)
and \code{afxsub} is an \code{AffyBatch}.  \code{afxsubRMAES}
is a proper ExpressionSet instance.

ilmMAQCsubR is the result of applying lumiR to the files
in the vicinity of GEO GSM122901 with filename suffixes matching
those of the sampleNames in the set.
\end{Note}
\begin{Examples}
\begin{ExampleCode}
  data(afxsubRMAES)
\end{ExampleCode}
\end{Examples}

