sysptmGN {sysptm.db}R Documentation

Map SysPTM protein identifier to Gene Name

Description

sysptmGN maps SysPTM protein identifier to the corresponding gene names.

Details

Each protein identifier maps to a vector containing the gene name or alias.

Mappings were based on data provided by: SysPTM (http://www.biosino.org/papers/SysPTM/Current/ptm ; http://www.biosino.org/papers/SysPTM/Current/name ; http://www.biosino.org/papers/SysPTM/Current/Protein_ID_equal) on v1.1, 2008-11-20

Examples

     # Convert to a list
     xx <- as.list(sysptmGN)
     # Remove protein that do not map to any GENENAME
     xx <- xx[!is.na(xx)]
     if(length(xx) > 0){
         # Gets the gene names for the first five probe identifiers
         xx[1:5]
         # Get the first one
         xx[[1]]
     }

[Package sysptm.db version 1.1.0 Index]