Map SCOP identifiers to their types

Description

scopTYPE provides mappings between SCOP entry identifiers and their types.

Details

Possible entry types are: cl - class

cf - fold

sf - superfamily

fa - family

dm - protein domain

sp - species

px - domain entry

Mappings were based on data provided by: SCOP (http://scop.mrc-lmb.cam.ac.uk/scop/parse/dir.des.scop.txt_1.73 ; http://scop.mrc-lmb.cam.ac.uk/scop/parse/dir.hie.scop.txt_1.73 ; http://scop.mrc-lmb.cam.ac.uk/scop/parse/dir.cla.scop.txt_1.73) on Release 1.73, November 2007

Examples

    # Convert to a list
    xx <- as.list(scopTYPE)
    if(length(xx) > 0){        
        xx[2:3]
    }