int.intactPPI {int.intact.db}R Documentation

Protein-Protein interaction

Description

int.intactPPI gives protein-protein interactions from IntAct database.

Details

Protein is is given as Uniprot protein accession number.

Mappings were based on data provided by: IntAct (ftp://ftp.ebi.ac.uk/pub/databases/intact/current/psimitab/intact.txt) on

Examples

     # Convert to a list
     xx <- as.list(int.intactPPI)     
     if(length(xx) > 0){
         # Gets the first five interaction list
         xx[1:5]
     }

[Package int.intact.db version 1.1.0 Index]