Map between probesets and KEGG pathway name

Description

gahgu95cKEGGNAME is an R object that maps probe identifiers to the corresponding KEGG pathway name.

Details

Each probeset maps to a named vector containing the KEGG pathway name. The vector name corresponds to the KEGG pathway ID. If the KEGG pathway name is unknown, the vector will contain an NA.

Mappings were based on data provided by: Genecards ( http://www.genecards.org ) on 2009-mag06

Examples

        x <- gahgu95cKEGGNAME
        # Get the probe identifiers that are mapped to a KEGG pathway name
        mapped_probes <- mappedkeys(x)
        # Convert to a list
        xx <- as.list(x[mapped_probes])
        if(length(xx) > 0) {
          # Get the KEGGNAME for the first five probes
          xx[1:5]
          # Get the first one
          xx[[1]]
        }