Map between Manufacturer IDs and Genes

Description

gahgu95bINTERPRODOMAIN is an R object that maps probeset identifiers to the corresponding Interpro domain.

Details

Each manufacturer identifier maps to a named vector containing the Interpro domain. The vector name corresponds to the Interpro IDs. If the Interpro domain is unknown, the vector will contain an NA.

Mappings were based on data provided by: Genecards ( http://www.genecards.org ) on 2009-mag06

Examples

        x <- gahgu95bINTERPRODOMAIN
        # Get the probe identifiers that are mapped to an Interpro domain
        mapped_probes <- mappedkeys(x)
        # Convert to a list
        xx <- as.list(x[mapped_probes])
        if(length(xx) > 0) {
          # Get the INTERPRODOMAIN for the first five probes
          xx[1:5]
          # Get the first one
          xx[[1]]
        }