gahgu133bINTERPRODOMAIN     package:gahgu133b.db     R Documentation

_M_a_p _b_e_t_w_e_e_n _M_a_n_u_f_a_c_t_u_r_e_r _I_D_s _a_n_d _G_e_n_e_s

_D_e_s_c_r_i_p_t_i_o_n:

     gahgu133bINTERPRODOMAIN is an R object that maps probeset
     identifiers to the corresponding Interpro domain.

_D_e_t_a_i_l_s:

     Each manufacturer identifier maps to a named vector containing the
     Interpro domain. The vector name corresponds to the Interpro IDs.
     If the Interpro domain is unknown, the vector will contain an
     'NA'.

     Mappings were based on data provided by: Genecards (
     http://www.genecards.org ) on 2009-mag06

_E_x_a_m_p_l_e_s:

             x <- gahgu133bINTERPRODOMAIN
             # Get the probe identifiers that are mapped to an Interpro domain
             mapped_probes <- mappedkeys(x)
             # Convert to a list
             xx <- as.list(x[mapped_probes])
             if(length(xx) > 0) {
               # Get the INTERPRODOMAIN for the first five probes
               xx[1:5]
               # Get the first one
               xx[[1]]
             }

