# Affymetrix bovine annotation data (chip bovine)

## Documentation for package ‘bovine.db’ version 2.2.11

## Help Pages

bovine | Bioconductor annotation data package
bovineACCNUM | Map Manufacturer identifiers to GenBank Accession Numbers
bovineALIAS2PROBE | Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
bovineCHR | Map Manufacturer IDs to Chromosomes
bovineCHRLENGTHS | A named vector for the length of each of the chromosomes
bovineCHRLOC | Map Manufacturer IDs to Chromosomal Location
bovineCHRLOCEND | Map Manufacturer IDs to Chromosomal Location
bovineENSEMBL | Map Ensembl gene accession numbers with Entrez Gene identifiers
bovineENSEMBL2PROBE | Map Ensembl gene accession numbers with Entrez Gene identifiers
bovineENTREZID | Map between Manufacturer Identifiers and Entrez Gene
bovineENZYME | Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
bovineENZYME2PROBE | Map between Enzyme Commission Numbers and Manufacturer Identifiers
bovineGENENAME | Map between Manufacturer IDs and Genes
bovineGO | Map between Manufacturer IDs and Gene Ontology (GO)
bovineGO2ALLPROBES | Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
bovineGO2PROBE | Map between Gene Ontology (GO) and Manufacturer Identifiers
bovineLOCUSID | Map between Manufacturer Identifiers and Entrez Gene
bovineMAPCOUNTS | Number of mapped keys for the maps in package bovine.db
bovineORGANISM | The Organism for bovine
bovinePATH | Mappings between probe identifiers and KEGG pathway identifiers
bovinePATH2PROBE | Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
bovinePFAM | Map Manufacturer IDs to Pfam IDs
bovinePMID | Map between Manufacturer Identifiers and PubMed Identifiers
bovinePMID2PROBE | Map between PubMed Identifiers and Manufacturer Identifiers
bovinePROSITE | Map Manufacturer IDs to PROSITE ID
bovineREFSEQ | Map between Manufacturer Identifiers and RefSeq Identifiers
bovineSYMBOL | Map between Manufacturer Identifiers and Gene Symbols
bovineUNIGENE | Map between Manufacturer Identifiers and UniGene cluster identifiers
bovineUNIPROT | Map Uniprot accession numbers with Entrez Gene identifiers
bovineUNIPROT2PROBE | Map Uniprot accession numbers with Entrez Gene identifiers
bovine_dbconn | Collect information about the package annotation DB
bovine_dbfile | Collect information about the package annotation DB
bovine_dbInfo | Collect information about the package annotation DB
bovine_dbschema | Collect information about the package annotation DB