plotSpkBox             package:spkTools             R Documentation

_B_o_x_p_l_o_t_s _o_f _F_o_l_d _C_h_a_n_g_e_s _C_a_l_c_u_l_a_t_e_d _b_y _s_p_k_B_o_x

_D_e_s_c_r_i_p_t_i_o_n:

     Plots boxplots of the data resulting from a call to spkBox.

_U_s_a_g_e:

     plotSpkBox(boxs, fc=2, box.names=NULL, ...)

_A_r_g_u_m_e_n_t_s:

    boxs: the output of a call to spkBox

      fc: expected fold change

box.names: names to be printed below each boxplot

     ...: parameters passed to boxplot

_V_a_l_u_e:

     Boxplots for spike-in and non-spike-in comparisons stratified by
     ALE strata are produced.

_A_u_t_h_o_r(_s):

     Matthew N. McCall

_E_x_a_m_p_l_e_s:

     data(affy)
     affySlope <- spkSlope(affy)
     affyBox <- spkBox(affy, affySlope)
     plotSpkBox(affyBox) 

