BrowserView-class        package:rtracklayer        R Documentation

_C_l_a_s_s "_B_r_o_w_s_e_r_V_i_e_w"

_D_e_s_c_r_i_p_t_i_o_n:

     An object representing a genome browser view of a particular
     segment of a genome.

_O_b_j_e_c_t_s _f_r_o_m _t_h_e _C_l_a_s_s:

     A virtual Class: No objects may be created from it directly. See
     'browserView' for obtaining an instance of an implementation for a
     particular genome browser.

_S_l_o_t_s:


     '_s_e_s_s_i_o_n': Object of class '"BrowserSession"' the browser session
          to which this view belongs. 

_M_e_t_h_o_d_s:

     This specifies the API implemented by each browser backend. Note
     that a backend is not guaranteed to support all operations. See
     the backend-specific documentation for more details. The only
     built-in backend is 'UCSCView'.

     '_b_r_o_w_s_e_r_S_e_s_s_i_o_n(_o_b_j_e_c_t)' Obtains the 'BrowserSession' to which
          this view belongs. 

     '_c_l_o_s_e(_o_b_j_e_c_t)' Close this view. 

     '_r_a_n_g_e(_o_b_j_e_c_t)' Obtains the 'RangesList' displayed by this view.

     '_t_r_a_c_k_N_a_m_e_s(_o_b_j_e_c_t)' Gets the names of the visible tracks in the
          view. 

     '_t_r_a_c_k_N_a_m_e_s(_o_b_j_e_c_t) <- _v_a_l_u_e' Sets the visible tracks by their
          names. 

     '_s_h_o_w(_o_b_j_e_c_t)' Outputs a textual description of this view. 

     '_v_i_s_i_b_l_e(_o_b_j_e_c_t)' Get a named logical vector indicating whether
          each track is visible.

     '_v_i_s_i_b_l_e(_o_b_j_e_c_t) <- _v_a_l_u_e' Set a logical vector indicating the
          visibility of each track, with the same names and in the same
          order as that returned by 'visible(object)'.


_A_u_t_h_o_r(_s):

     Michael Lawrence

_S_e_e _A_l_s_o:

     'browserView' for obtaining instances of this class.

