indRender              package:keggorth              R Documentation

_i_n_d_e_n_t_e_d _t_e_x_t_u_a_l _r_e_n_d_e_r_i_n_g _o_f _n_o_d_e_s _o_f _a _h_i_e_r_a_r_c_h_i_c_a_l _g_r_a_p_h

_D_e_s_c_r_i_p_t_i_o_n:

     indented textual rendering of nodes of a hierarchical graph

_U_s_a_g_e:

     indRender(klike, from=nodes(klike)[1], indent="  ")

_A_r_g_u_m_e_n_t_s:

   klike: a graph, with tree structure similar to 'KOgraph'

    from: a node name from which the rendering should proceed to all
          leaves

  indent: token to use for indentation - will be replicated to depth of
          node to be rendered to its left

_D_e_t_a_i_l_s:

     based on keggorth read of KEGG orthology, periodic, as of bioc 2.1
     not folded into the annotation build system, but will be ASAP

_V_a_l_u_e:

     NULL

_A_u_t_h_o_r(_s):

     Vince Carey <stvjc@channing.harvard.edu>

_E_x_a_m_p_l_e_s:

     data(KOgraph)
     indRender(KOgraph, "Human Diseases")

