Entry: DataSet-class
Aliases: DataSet-class
Keywords: classes data
Description: DataSet - class
URL: ../../../library/genArise/html/DataSet-class.html

Entry: Simon
Aliases: Simon
Keywords: datasets
Description: Dataset: Little fragment of a microarray from IFC UNAM
URL: ../../../library/genArise/html/Simon.html

Entry: Spot-class
Aliases: Spot-class
Keywords: classes data
Description: Spot - class
URL: ../../../library/genArise/html/Spot-class.html

Entry: WT.dataset
Aliases: WT.dataset
Keywords: datasets
Description: Microarray from the IFC
URL: ../../../library/genArise/html/WT.dataset.html

Entry: Zscore
Aliases: Zscore
Keywords: arith math
Description: Z-scores for identifying differential expression
URL: ../../../library/genArise/html/Zscore.html

Entry: Zscore.plot
Aliases: Zscore.plot
Keywords: aplot
Description: Z-score Data Visualization: R vs I or M vs A
URL: ../../../library/genArise/html/Zscore.plot.html

Entry: Zscore.points
Aliases: Zscore.points
Keywords: aplot
Description: Z-score Window
URL: ../../../library/genArise/html/Zscore.points.html

Entry: a.arise
Aliases: a.arise
Keywords: math arith
Description: A Arise
URL: ../../../library/genArise/html/a.arise.html

Entry: alter.unique
Aliases: alter.unique
Keywords: math arith
Description: Remove Duplicates
URL: ../../../library/genArise/html/alter.unique.html

Entry: analysis.window
Aliases: analysis.window
Keywords: math
Description: Analysis.window
URL: ../../../library/genArise/html/analysis.window.html

Entry: annotations
Aliases: annotations
Keywords: math
Description: Gene Annotations
URL: ../../../library/genArise/html/annotations.html

Entry: back.gui
Aliases: back.gui
Keywords: IO
Description: Return to the last window
URL: ../../../library/genArise/html/back.gui.html

Entry: bg.correct
Aliases: bg.correct
Keywords: math
Description: Background Correction
URL: ../../../library/genArise/html/bg.correct.html

Entry: classes
Aliases: classes
Keywords: documentation
Description: Classes Defined by this Package
URL: ../../../library/genArise/html/classes.html

Entry: create.project
Aliases: create.project
Keywords: arith
Description: create.project
URL: ../../../library/genArise/html/create.project.html

Entry: cys.plot
Aliases: cys.plot
Keywords: graphs aplot
Description: Data Visualization: log2(Cy3) vs log2(Cy5)
URL: ../../../library/genArise/html/cys.plot.html

Entry: filter.spot
Aliases: filter.spot
Keywords: arith math
Description: Intensity-based filtering of array elements
URL: ../../../library/genArise/html/filter.spot.html

Entry: genArise
Aliases: genArise
Keywords: math arith
Description: GUI: Graphical User Interface
URL: ../../../library/genArise/html/genArise.html

Entry: genArise.init
Aliases: genArise.init
Keywords: math
Description: genArise.init
URL: ../../../library/genArise/html/genArise.init.html

Entry: genMerge
Aliases: genMerge
Keywords: math
Description: genMerge: Post-Genomic Analysis
URL: ../../../library/genArise/html/genMerge.html

Entry: get.Zscore
Aliases: get.Zscore
Keywords: file
Description: Swap from Files
URL: ../../../library/genArise/html/get.Zscore.html

Entry: get.values
Aliases: get.values
Keywords: arith
Description: Auxiliar function for post-analysis
URL: ../../../library/genArise/html/get.values.html

Entry: global.norm
Aliases: global.norm
Keywords: arith math
Description: Global Normalization of Spot
URL: ../../../library/genArise/html/global.norm.html

Entry: graphic.choose
Aliases: graphic.choose
Keywords: math
Description: Graphic choose
URL: ../../../library/genArise/html/graphic.choose.html

Entry: grid.norm
Aliases: grid.norm
Keywords: arith math
Description: Normalization by grid of Spot
URL: ../../../library/genArise/html/grid.norm.html

Entry: help
Aliases: help
Keywords: documentation
Description: Help of genArise
URL: ../../../library/genArise/html/help.html

Entry: i.arise
Aliases: i.arise
Keywords: math
Description: I Arise
URL: ../../../library/genArise/html/i.arise.html

Entry: imageLimma
Aliases: imageLimma
Keywords: color
Description: Image Plot of Microarray
URL: ../../../library/genArise/html/imageLimma.html

Entry: m.arise
Aliases: m.arise
Keywords: math arith
Description: M Arise
URL: ../../../library/genArise/html/m.arise.html

Entry: ma.plot
Aliases: ma.plot
Keywords: aplot arith
Description: Data Visualization: M vs. A plot
URL: ../../../library/genArise/html/ma.plot.html

Entry: make.swap
Aliases: make.swap
Keywords: file
Description: Swap analysis
URL: ../../../library/genArise/html/make.swap.html

Entry: meanUnique
Aliases: meanUnique
Keywords: math
Description: Remove Duplicates
URL: ../../../library/genArise/html/meanUnique.html

Entry: note
Aliases: note
Keywords: arith
Description: note
URL: ../../../library/genArise/html/note.html

Entry: old.project
Aliases: old.project
Keywords: file
Description: Open previous project
URL: ../../../library/genArise/html/old.project.html

Entry: post.analysis
Aliases: post.analysis
Keywords: file
Description: Set-combinatorial analysis
URL: ../../../library/genArise/html/post.analysis.html

Entry: principal
Aliases: principal
Keywords: color
Description: Principal window of genAriseGUI
URL: ../../../library/genArise/html/principal.html

Entry: project.select
Aliases: projects.select
Keywords: file
Description: File selector
URL: ../../../library/genArise/html/projects.select.html

Entry: r.arise
Aliases: r.arise
Keywords: math arith
Description: Get R value
URL: ../../../library/genArise/html/r.arise.html

Entry: read.dataset
Aliases: read.dataset
Keywords: file
Description: Read Dataset from File
URL: ../../../library/genArise/html/read.dataset.html

Entry: read.spot
Aliases: read.spot
Keywords: file
Description: Read Spot from File
URL: ../../../library/genArise/html/read.spot.html

Entry: reset.history
Aliases: reset.history
Keywords: file
Description: Reset the prj history file
URL: ../../../library/genArise/html/reset.history.html

Entry: ri.plot
Aliases: ri.plot
Keywords: aplot
Description: Data Visualization: R vs I
URL: ../../../library/genArise/html/ri.plot.html

Entry: set.grid.properties
Aliases: set.grid.properties
Keywords: IO
Description: set.grid.properties
URL: ../../../library/genArise/html/set.grid.properties.html

Entry: set.history.project
Aliases: set.history.project
Keywords: file
Description: Save the history of a project
URL: ../../../library/genArise/html/set.history.project.html

Entry: set.path.project
Aliases: set.path.project
Keywords: arith
Description: set.path.project
URL: ../../../library/genArise/html/set.path.project.html

Entry: set.project.properties
Aliases: set.project.properties
Keywords: arith
Description: set.project.properties
URL: ../../../library/genArise/html/set.project.properties.html

Entry: single.norm
Aliases: single.norm
Keywords: file
Description: Swap from Files
URL: ../../../library/genArise/html/single.norm.html

Entry: spotUnique
Aliases: spotUnique
Keywords: math
Description: Replicate filtering
URL: ../../../library/genArise/html/spotUnique.html

Entry: swap.select
Aliases: swap.select
Keywords: file
Description: Dye swap files selector
URL: ../../../library/genArise/html/swap.select.html

Entry: trim
Aliases: trim
Keywords: character
Description: Trim
URL: ../../../library/genArise/html/trim.html

Entry: write.dataSet
Aliases: write.dataSet
Keywords: file
Description: Write dataSet
URL: ../../../library/genArise/html/write.dataSet.html

Entry: write.spot
Aliases: write.spot
Keywords: file
Description: Write Spot
URL: ../../../library/genArise/html/write.spot.html

Entry: write.zscore
Aliases: write.zscore
Keywords: file
Description: Write Z-score data
URL: ../../../library/genArise/html/write.zscore.html
