| exp_loadData {explorase} | R Documentation |
Load experimental data of a specified type into exploRase (and GGobi).
exp_loadData(exp_data, data_name = "expression", ent_type = "gene", sync = FALSE, add_to_design = !nrow(exp_designFrame(ent_type)))
exp_data |
a data frame containing experimental data, with observations as rows and conditions as columns. |
data_name |
name of the dataset in GGobi |
ent_type |
the entity type ("gene", "met", ...) of the data |
sync |
whether to synchronize the other data models with the
experimental data. If sync is TRUE, the entity
information and experimental design tables will be limited to the observations
and conditions, respectively, in the experimental data. This is
experimental. |
add_to_design |
whether to add the columns in the dataset as conditions in the experimental design, if they are not there already |
Organizes experimental data, loads it into GGobi and synchronizes it with other data (design and entity info)
Michael Lawrence <mflawren@fhcrc.org>