msubseq             package:biocDatasets             R Documentation

_T_a_k_e _m_u_l_t_i_p_l_e _s_u_b_s_e_q_u_e_n_c_e_s

_D_e_s_c_r_i_p_t_i_o_n:

     Take multiple subsequences from one sequence

_U_s_a_g_e:

     msubseq(x, ir)

_A_r_g_u_m_e_n_t_s:

       x: 'Sequence' object 

      ir: 'IRanges' object 

_D_e_t_a_i_l_s:

     Take the subsequences defined by an 'IRanges' 'ir' from a
     'Sequence' 'x'.

_V_a_l_u_e:

     A 'DNAStringSet'.

_S_e_e _A_l_s_o:

     'subseq'

_E_x_a_m_p_l_e_s:

     dna_length <- 100
     dna <- randomDNASequences(1, dna_length)[[1]]

     ir <- randomIRanges(100, 25, 10, dna_length)

     dna_chunks <- msubseq(dna, ir)

