ebf92d5b4e68128d31a3e9249f0fa6b1 *CITATION
8ac5b24ebadcedade1b024e41c1ffdc9 *CONTENTS
1f0b2dd7f931ee4b8b0765c4737960c3 *DESCRIPTION
f59f3930a36437c91ff87d2024f8f9dd *INDEX
05f6e5da10b044fa90012da2bf420aa2 *Meta/Rd.rds
8fead617f1180bda53b98c34822a226a *Meta/data.rds
5a959246267328205586cfebe16574bd *Meta/hsearch.rds
dd10235bd031b179900831ecd6cc9fc8 *Meta/nsInfo.rds
f76beb0ae84e4cddabd96550ff77a677 *Meta/package.rds
73ddc778a9ffefee027ef5cda5aadb26 *Meta/vignette.rds
13667595a59dcb5241d3a20090f047a4 *NAMESPACE
687d8d8d4d6b3d34b6fd4c45971fe7d5 *R-ex/AffyProbesMatch-class.R
ef056aef70c8d32bff76e458f80c077f *R-ex/CdfEnvAffy-class.R
59a6082644900b0cc39dd4832cb2b082 *R-ex/appendCdfEnvAffy.R
4d14eeb261e9fe7fafdc1a7557cc9cae *R-ex/cdfenv.R
bde54fa24c0ee192998db22ad161028f *R-ex/cdfenvEx.R
774bf1bced096b953f614b49973c99fa *R-ex/getxy.probeseq.R
e74015ef077e1c3924f4e75d76baef93 *R-ex/index2xy.R
911432f581190566bae7c2cae4e73b83 *R-ex/matchAffyProbes.R
93ee643bc9a65969b535e957be6728a7 *R-ex/plot.CdfEnvAffy.R
2ca0ca4cd73adf244d1113e56aa62ec2 *R-ex/removeIndex.R
58f1472aba445b82cae9a2af66502925 *R-ex/unique.CdfEnvAffy.R
144ee707c369fb2a9d9dc20b8cd378d9 *R-ex/utils.FASTA.R
576d33b2d8f54e685d04338437b19d49 *R-ex/validAffyBatch.R
f07d3015c4220dea7a7be8c741d2985b *R/altcdfenvs
4e279e49e65301640d0a373f40227b91 *R/altcdfenvs.rdb
cb3861a1b60a3bbf528d964ed2be0dcd *R/altcdfenvs.rdx
0a53f074a258da10446d67b6f097aacc *UnitTests/AffyProbesMatch_test.R
d8903c8e458d17e2cd940026be619f40 *chtml/altcdfenvs.chm
fb787de9457f21aeccc82923652aafc0 *data/cdfenvEx.rda
b63293f1b2dd685af70a9108df69c07a *doc/Rplots.pdf
e4fef0ef5c4d6abb4f0d80c409538513 *doc/altcdfenvs.R
107e3afa0da849fbbb8e2e4a8302db1f *doc/altcdfenvs.Rnw
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a939a2adb25018a3143c37416322162b *doc/index.html
3c1c9298bf14af9d709fc270530b42ba *doc/modify.R
d86d10734a5599d889e3945552c201a2 *doc/modify.Rnw
a0dd34f64ae446adbf2c34658a4b7a5b *doc/modify.pdf
c35cb7e08ba9ca0b317e737ebe95a8f5 *doc/ngenomeschips.R
ba7db7046e9386053a1d5a1057b2509a *doc/ngenomeschips.Rnw
7974ef1d4745827cd3de920a26cb12d3 *doc/ngenomeschips.pdf
7499a24844858824a246ca8ef35be87d *exampleData/Plasmodium-Probeset-IDs.txt
9e2e95d99c194250d94f4cc0b6f40fd4 *exampleData/sample.fasta
b4571cde85de0a3298b4fecb3110406c *exampleData/slamf_targets.RData
4ae7d19461c97297e7211ac5ffb33559 *help/AffyProbesMatch-class
9f0ce88ed69b9882b9bb5f6cc4f1bd67 *help/AnIndex
9b84f94ea4605a33504729bf4c8a68df *help/CdfEnvAffy-class
139c18ae35ade55ac6eaee6124d5c34c *help/appendCdfEnvAffy
32b2428e8005db63da412db33ae432f5 *help/buildCdfEnv.biostrings
4ebe92ff4f0867d081dd5f99361a91b9 *help/cdfenv
b12d60957c18fafa113d2deae80061cb *help/cdfenvEx
5f195c8c1dc61ebb0cfb33bf549fd699 *help/copyCdfEnvAffy
712ea3831313b3b7b7a8eecfaf250997 *help/countduplicated
5fc3901c78de4f357335b2e4677e2423 *help/geneNames
98188a5090ad9f32074d9f9ca552dda1 *help/getxy.probeseq
048e94e83b0ab7997fe5219566b54d01 *help/index2xy
1d93fe8016f27354bba97db580470359 *help/indexProbes.CdfEnvAffy
1591504b991f5458b0b117a78b9bd382 *help/matchAffyProbes
53449a548e4ed77a3c469e6274c89db9 *help/plot.CdfEnvAffy
21b9c6c4389e91bd52b7cba6af026653 *help/removeIndex
25221427b5e3c6444b794c1c47e49583 *help/toHypergraph
2700dbe400246d3f010fa5ab971c43a7 *help/unique.CdfEnvAffy
d4c9456caace6fcbfef36a07a8b8719b *help/utils.FASTA
d9ee2946096279bc7f6c7af4ae7701e2 *help/validAffyBatch
8481f9c0868fd4d24bcd2cd568ed2e9f *html/00Index.html
f886524508fcb5e8557500b9fd5e8fd3 *html/AffyProbesMatch-class.html
e1446c20a5b44725cdcc6c43c748c421 *html/CdfEnvAffy-class.html
64bcce605ab932d109014b43be17e0f5 *html/appendCdfEnvAffy.html
c5b3add684e8883842bc999e0a60a585 *html/buildCdfEnv.biostrings.html
5a66744469f2be0a149017a0e51a1e43 *html/cdfenv.html
730c7fc7a3e77fbb58c6e8b68a72dfe4 *html/cdfenvEx.html
7485da4e7b7bf2a302abedce5ca865ca *html/copyCdfEnvAffy.html
978336430fd54101ce18e0fd92358865 *html/countduplicated.html
675ba594ad71c000339cfb8d4e7c52da *html/geneNames.html
60e1fd208955871a487f99595e1734d6 *html/getxy.probeseq.html
9a72c41cbcd8a6c7338c37cfb89947fe *html/index2xy.html
6d15365553ed52dcd58661ffe55bb232 *html/indexProbes.CdfEnvAffy.html
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9e35ca6e2b8441282c3f4c0eac37c959 *html/plot.CdfEnvAffy.html
669a5f029e52d0aa98f4169ad427d674 *html/removeIndex.html
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18ff12172cccfbba22d01393fc51eb9f *html/unique.CdfEnvAffy.html
cb2a9ec225b5b0a116c402a8ee7e77d6 *html/utils.FASTA.html
ceaad84e2e55a7312fb3e6617815ee23 *html/validAffyBatch.html
8760e3eaecf5a33901680efd0d24b781 *internalData/chipspecs.tab
3670f2dd06caef31aa6fddef32250e32 *latex/AffyProbesMatch-class.tex
0f1f083adc674943c243a100f4d8bef0 *latex/CdfEnvAffy-class.tex
3a0637f746aa54556aa1c677b7139a23 *latex/appendCdfEnvAffy.tex
83a9d316d1d72d71cd03604fa8296696 *latex/buildCdfEnv.biostrings.tex
597da997fe9bfa3b1461427df5eb6fbd *latex/cdfenv.tex
c58abe3933d7e62e3829699261b4e36d *latex/cdfenvEx.tex
3ce8cdf393c7469f0c0a18678244ee70 *latex/copyCdfEnvAffy.tex
3c70a0d09ca5b8db631dc0efb6ed0824 *latex/countduplicated.tex
84982cb11a9e4417e8ae37c9d46cc480 *latex/geneNames.tex
0938cc64679e85f1cfb5a97df0b46ba7 *latex/getxy.probeseq.tex
b552d035f1f00d27ac4eb91e76e4b340 *latex/index2xy.tex
2691a58003be7fb89b13cdec95caf1b1 *latex/indexProbes.CdfEnvAffy.tex
22ad97fbe2c9f7e83efd307f3794e423 *latex/matchAffyProbes.tex
765ae3d73500b5723a313100a4e44524 *latex/plot.CdfEnvAffy.tex
f90daf72c94115f0bac0fba10768c823 *latex/removeIndex.tex
8a690c3c384b5778a211b96f1dd6f802 *latex/toHypergraph.tex
9dd644e63c7393c466f1046ddd4163c2 *latex/unique.CdfEnvAffy.tex
3a7928bc791b40f12bf4fcc466c53019 *latex/utils.FASTA.tex
e0c854f610ee23e8b33869d34174c00c *latex/validAffyBatch.tex
10c4d1f950aa40ca99a122b8c42e0290 *man/altcdfenvs.Rd.gz
