Entry: ClassifierBuild
Aliases: ClassifierBuild ClassifierBuild.default
Keywords: file
Description: Building a classifier as a combination of preprocessing and classification method
URL: ../../../library/MCRestimate/html/ClassifierBuild.html

Entry: MCRconfusion
Aliases: MCRconfusion MCRwrongsamples
Keywords: file
Description: Summary tables for MCRestimate objects
URL: ../../../library/MCRestimate/html/MCRconfusion.html

Entry: MCRestimate
Aliases: MCRestimate MCRestimate.default print.MCRestimate
Keywords: file
Description: Estimation of misclassification error by cross-validation
URL: ../../../library/MCRestimate/html/MCRestimate.html

Entry: MCRestimateMerge
Aliases: MCRestimateMerge
Keywords: file
Description: Merging objects of class MCRestimate
URL: ../../../library/MCRestimate/html/MCRestimateMerge.html

Entry: PLR
Aliases: PLR predict.PLR
Keywords: file
Description: A function which performs penalised logistic regression classification for two groups
URL: ../../../library/MCRestimate/html/PLR.html

Entry: SVM.OVA.wrap
Aliases: SVM.OVA.wrap
Keywords: file
Description: SVM with 'One-Versus-All' multiclass approach
URL: ../../../library/MCRestimate/html/SVM.OVA.wrap.html

Entry: class.factor.format
Aliases: class.factor.format
Keywords: file
Description: A function for creating a factor from the phenoData slot of an exprSet
URL: ../../../library/MCRestimate/html/class.factor.format.html

Entry: varSel.highest.var
Aliases: varSel.highest.var varSel.highest.t.stat varSel.AUC varSel.removeManyNA varSel.impute.NA identity cluster.kmeans.mean
Keywords: file
Description: Variable selection and cluster functions
URL: ../../../library/MCRestimate/html/geneReduction.html

Entry: important.variable.names
Aliases: important.variable.names
Keywords: file
Description: Writing tables with variable information
URL: ../../../library/MCRestimate/html/important.variable.names.html

Entry: MCRindError
Aliases: MCRindError plotIndGroupVotes
Keywords: file
Description: Individual Error of the outer cross-validations
URL: ../../../library/MCRestimate/html/indVotes.html

Entry: intersectList
Aliases: intersectList
Keywords: file
Description: A function for creating a all possible intersects for a list of sets.
URL: ../../../library/MCRestimate/html/intersectList.html

Entry: plot.MCRestimate
Aliases: plot.MCRestimate
Keywords: file
Description: Plot method for a objects of class MCRestimate
URL: ../../../library/MCRestimate/html/plot.MCRestimate.html

Entry: replace.NA
Aliases: replace.NA
Keywords: file
Description: Replaces in a given numeric matrix NA values per row or per column.
URL: ../../../library/MCRestimate/html/replace.NA.html

Entry: select.NA.elements
Aliases: select.NA.elements
Keywords: file
Description: Selects NA values of a given numeric matrix
URL: ../../../library/MCRestimate/html/select.NA.elements.html

Entry: RF.wrap
Aliases: RF.wrap PAM.wrap PLR.wrap SVM.wrap GPLS.wrap
Keywords: file
Description: Wrapper function for different classification methods
URL: ../../../library/MCRestimate/html/wrapper.fkt.html
