LBEsummary                package:LBE                R Documentation

_D_i_s_p_l_a_y _L_B_E _o_b_j_e_c_t

_D_e_s_c_r_i_p_t_i_o_n:

     Display summary information for an LBE object.

_U_s_a_g_e:

     LBEsummary(LBEobj, cuts = c(1e-04, 0.001, 0.01, 0.025, 0.05, 0.1, 1), digits = getOption("digits"), ...)

_A_r_g_u_m_e_n_t_s:

  LBEobj: LBE object. 

    cuts: Vector of significance value to use for table. 

  digits: Significant digits to display. 

     ...: Any other arguments. 

_D_e_t_a_i_l_s:

     LBEsumary shows the original call, estimated proportion of true
     null hypotheses, confidence interval for the proportion of true
     null hypotheses and a table comparing the number of significant
     calls for the p-values and for the estimated q-values using a set
     of cutoffs given by the argument cuts.

_V_a_l_u_e:

     Invisibly returns the original object.

_N_o_t_e:

     The function LBEsummary is analogous to the function qsummary from
     the package 'qvalue'.

_A_u_t_h_o_r(_s):

     Cyril Dalmasso

_S_e_e _A_l_s_o:

     'LBE', 'LBEplot', 'LBEwrite', 'LBEa'

_E_x_a_m_p_l_e_s:

     ## start
     data(hedenfalk.pval)
     res<-LBE(hedenfalk.pval)
     print(res)
     LBEsummary(res)
     ## end

