summary,StabilityOverlap    package:GeneSelector    R Documentation

_S_u_m_m_a_r_i_z_e _O_v_e_r_l_a_p _S_c_o_r_e_s

_D_e_s_c_r_i_p_t_i_o_n:

     Returns a five-point summary of overlap counts and scores, where
     the summary is done with respect to the different perturbed
     datasets.

_A_r_g_u_m_e_n_t_s:

  object: An object of class 'StabilityOverlap'


          "_s_c_o_r_e_s" Summary with respect to  overlap score.

          "_o_v_e_r_l_a_p" Summary with respect to the number of overlaps.

position: Up to which position in the list (rank) overlap and score are
          computed. For instance, if 'position=100'(default) then the
          summary is based on overlaps/scores on the lists of the top
          100 genes.

_A_u_t_h_o_r(_s):

     Martin Slawski martin.slawski@campus.lmu.de 
      Anne-Laure Boulesteix <URL: http://www.slcmsr.net/boulesteix>

_R_e_f_e_r_e_n_c_e_s:

     Lottaz, C., Yang, X., Scheid, S., Spang, R. (2006) 
      OrderedList - a Bioconductor package for detecting similarity in
     ordered gene lists. _Bioinformatics, 22, 2315-2316_

_S_e_e _A_l_s_o:

     StabilityOverlap

