getParam                package:GeneR                R Documentation

_R_e_a_d_i_n_g _o_f _a_l_l _t_h_e _G_e_n_e_R _g_l_o_b_a_l _v_a_r_i_a_b_l_e_s

_D_e_s_c_r_i_p_t_i_o_n:

     Gives all the GeneR global variables associated to a sequence

_U_s_a_g_e:

     getParam(seqno=0)

_A_r_g_u_m_e_n_t_s:

   seqno: Integer/scalar, Sequence number (buffer number)

_D_e_t_a_i_l_s:

     All details on addresses and global variables can be found on page
     'globals'.

_V_a_l_u_e:

     A list with

  Strand: Running working strand (0 -> forward, 1 -> reverse)

   begin: beginning position of the loaded sequence

     end: ending position of the loaded sequence

    size: size of the parent sequence (to allow computations of
          relative adresses)

    name: name of the loaded sequence

_A_u_t_h_o_r(_s):

     L. Cottret

_S_e_e _A_l_s_o:

     'setParam'

