resample           package:BiocCaseStudies           R Documentation

_R_e_s_a_m_p_l_e _f_r_o_m _A_L_L _E_x_p_r_e_s_s_i_o_n_S_e_t _a_n_d _p_l_o_t

_D_e_s_c_r_i_p_t_i_o_n:

     A function to resample samples from each class of an ExpressionSet
     and plot the results calculated by a function that returns the
     number of differentially expressed genes between the classes.

_U_s_a_g_e:

     resample(x, selfun, groupsize = 6 * (1:6), nrep = 25)

_A_r_g_u_m_e_n_t_s:

       x: An 'ExpressionSet' object derived from the 'ALL' data
          package.

  selfun: A function that takes the resampling subset of the
          'ExpressionSet' and computes the number of differentially
          expressed genes between the two classes

groupsize: The number of samples for each class

    nrep: number of iterations of resampling procedure

_V_a_l_u_e:

     The function is called for the side effect of producing a plot.

_A_u_t_h_o_r(_s):

     Florian Hahne

