Experimental Data Package: MAQCsubset

Description

selected data from the MAQC project (Nature Biotechnology, Sept. 2006)

Usage

data(afxsubRMAES)
data(afxsubRMA)
data(afxsub)

Format

The format is: An ExpressionSetObject with covariates:

• site: from cel
• samp: rna src/mixture code
• repl: replicate

Note

afxsubRMA is an exprSet (deprecated) and afxsub is an AffyBatch. afxsubRMAES is a proper ExpressionSet instance.

ilmMAQCsubR is the result of applying lumiR to the files in the vicinity of GEO GSM122901 with filename suffixes matching those of the sampleNames in the set.

Examples

  data(afxsubRMAES)