basecontent              package:oligo              R Documentation

_S_e_q_u_e_n_c_e _B_a_s_e _C_o_n_t_e_n_t_s

_D_e_s_c_r_i_p_t_i_o_n:

     Function to compute the amounts of each nucleotide in a sequence.

_U_s_a_g_e:

     basecontent(seq)

_A_r_g_u_m_e_n_t_s:

     seq: character vector of length 'n' containg a valid sequence
          (A/T/C/G)

_V_a_l_u_e:

     'matrix' with 'n' rows and 4 columns with the counts for each
     base.

_E_x_a_m_p_l_e_s:

     sequences <- c("ATATATCCCCG", "TTTCCGAGC")
     basecontent(sequences)

