Entry: KS
Aliases: KS
Keywords: classif
Description: Calculate Kolmogorov Smirnov rank sum scores.
URL: ../../../library/dualKS/html/KS.html

Entry: DKSClassifier
Aliases: class:DKSClassifier DKSClassifier DKSClassifier-class
Keywords: classes
Description: Class to contain gene set signatures.
URL: ../../../library/dualKS/html/class.DKSClassifier.html

Entry: DKSGeneScores
Aliases: class:DKSGeneScores DKSGeneScores DKSGeneScores-class
Keywords: classes
Description: Class to contain dual Kolmogorov Smirnov rank sum discriminant analysis results for gene expression data.
URL: ../../../library/dualKS/html/class.DKSGeneScores.html

Entry: DKSGeneSet
Aliases: class:DKSGeneSet DKSGeneSet DKSGeneSet-class
Keywords: classes
Description: Class to contain gene signatures.
URL: ../../../library/dualKS/html/class.DKSGeneSet.html

Entry: DKSPredicted
Aliases: class:DKSPredicted DKSPredicted DKSPredicted-class plot,DKSPredicted-method plot,DKSPredicted,missing-method show,DKSPredicted-method summary,DKSPredicted-method
Keywords: classes
Description: Class to contain classification results from dksClassify
URL: ../../../library/dualKS/html/class.DKSPredicted.html

Entry: dks
Aliases: dks eset pv.f pvr.f
Keywords: datasets
Description: A demonstration data set for package dualKS.
URL: ../../../library/dualKS/html/dks.html

Entry: dksClassify
Aliases: dksClassify
Keywords: classif
Description: Predict classes for gene expression sets.
URL: ../../../library/dualKS/html/dksClassify.html

Entry: dksCustomClass
Aliases: dksCustomClass
Keywords: classif
Description: Create a classification object from predefined gene signature.
URL: ../../../library/dualKS/html/dksCustomClass.html

Entry: dksPerm
Aliases: dksPerm
Keywords: classif
Description: Estimate significance of signature scores.
URL: ../../../library/dualKS/html/dksPerm.html

Entry: dksSelectGenes
Aliases: dksSelectGenes
Keywords: classif
Description: Extract gene signatures from a DKSGeneScores object.
URL: ../../../library/dualKS/html/dksSelectGenes.html

Entry: dksTrain
Aliases: dksTrain
Keywords: classif
Description: Perform Dual KS Discriminant Analysis
URL: ../../../library/dualKS/html/dksTrain.html

Entry: dksWeights
Aliases: dksWeights
Keywords: classif
Description: Calculate gene weights based on average expression.
URL: ../../../library/dualKS/html/dksWeights.html

Entry: dualKS-package
Aliases: dualKS-package dualKS
Keywords: package
Description: Dual KS Discriminant Analysis and Classification
URL: ../../../library/dualKS/html/dualKS-package.html
