| qa {ShortRead} | R Documentation |
This function is a common interface to quality assessment functions
available in ShortRead. Results from this function may be
displayed in brief, or integrated into reports using, e.g.,
report.
qa(dirPath, ...)
dirPath |
A character vector or other object (e.g.,
SolexaPath; see showMethods, below) locating
the data for which quality assessment is to be performed. See help
pages for defined methods (by evaluating the example code, below)
for details of available methods. |
... |
Additional arguments used by methods. |
The following methods are defined:
dirPath="character", pattern="character", type="SolexaExport", ...dirPath whose file name matches pattern. The type of
analysis performed is based on the type argument.
An object derived from class .QA
Martin Morgan <mtmorgan@fhcrc.org>
showMethods("qa")