SAGEToolTips            package:SAGElyzer            R Documentation

_A _l_i_s_t _t_h_a_t _m_a_p_s _S_A_G_E _t_a_s_k _o_r _p_r_o_c_e_d_u_r_e _n_a_m_e_s _t_o _t_i_p_s

_D_e_s_c_r_i_p_t_i_o_n:

     This binary data is for the purpose of providing tooltips for
     SAGElyzer

_U_s_a_g_e:

     data(SAGEToolTips)

_F_o_r_m_a_t:

     The format is:

_M_a_n_a_g_e _D_a_t_a Get and map SAGE data and wrtite to a database

_k_n_n Performs knn on a selected tag and presents the results 

_R_u_n _k_n_n Run knn based on the target tag and selected SAGE libraries 

_G_e_t _c_o_u_n_t_s Get counts for tags neighboring the target tag acroos
     selected libraries  

_M_a_p _S_A_G_E Map tags that are neighbors of the target tag to UniGene id
     and link to UniGene web site for annotation  

_G_e_t _G_E_O _S_A_G_E Get SAGE libraries from GEO web site

_I_n_t_e_g_r_a_t_e _S_A_G_E Put data from SAGE libraries to a database

_M_a_p _S_A_G_E Download and write mappings between SAGE tags and UniGene ids
     to a database   

_S_e_t _a_r_g_u_m_e_n_t_s Set the arguments for knn

_E_x_a_m_p_l_e_s:

     data(SAGEToolTips)
     SAGEToolTips

