summary,StabilityOverlap {GeneSelector} | R Documentation

## Summarize Overlap Scores

### Description

Returns a five-point summary of overlap counts and scores, where the summary is done with respect to the different perturbed datasets.

### Arguments

`object` | An object of class `StabilityOverlap`
`which` | "scores" Summary with respect to overlap score. "overlap" Summary with respect to the number of overlaps.
`position` | Up to which position in the list (rank) overlap and score are computed. For instance, if `position=100`(default) then the summary is based on overlaps/scores on the lists of the top 100 genes.

### Author(s)

Martin Slawski martin.slawski@campus.lmu.de
Anne-Laure Boulesteix http://www.slcmsr.net/boulesteix

### References

Lottaz, C., Yang, X., Scheid, S., Spang, R. (2006)
OrderedList - a Bioconductor package for detecting similarity in ordered gene lists. Bioinformatics, 22, 2315-2316

### See Also

StabilityOverlap

[Package GeneSelector version 1.2.0 Index]