# GE CodeLink Rat Inflammation 16 Bioarray annotation data (chip ri16cod)

## Documentation for package ‘ri16cod.db’ version 2.0.1

## Help Pages

ri16cod | Bioconductor annotation data package
ri16codACCNUM | Map Manufacturer identifiers to GenBank Accession Numbers
ri16codALIAS2PROBE | Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
ri16codCHR | Map Manufacturer IDs to Chromosomes
ri16codCHRLENGTHS | A named vector for the length of each of the chromosomes
ri16codCHRLOC | Map Manufacturer IDs to Chromosomal Location
ri16codENSEMBL | Map Ensembl gene accession numbers with manufacturer identifiers
ri16codENSEMBL2PROBE | Map Ensembl gene accession numbers with manufacturer identifiers
ri16codENTREZID | Map between Manufacturer Identifiers and Entrez Gene
ri16codENZYME | Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
ri16codENZYME2PROBE | Map between Enzyme Commission Numbers and Manufacturer Identifiers
ri16codGENENAME | Map between Manufacturer IDs and Genes
ri16codGO | Map between Manufacturer IDs and Gene Ontology (GO)
ri16codGO2ALLPROBES | Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
ri16codGO2PROBE | Map between Gene Ontology (GO) and Manufacturer Identifiers
ri16codLOCUSID | Map between Manufacturer Identifiers and Entrez Gene
ri16codMAP | Map between Manufacturer Identifiers and cytogenetic maps/bands
ri16codMAPCOUNTS | Number of mapped keys for the maps in package ri16cod.db
ri16codORGANISM | The Organism for ri16cod
ri16codPATH | Mappings between probe identifiers and KEGG pathway identifiers
ri16codPATH2PROBE | Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
ri16codPFAM | Map Manufacturer IDs to Pfam IDs
ri16codPMID | Map between Manufacturer Identifiers and PubMed Identifiers
ri16codPMID2PROBE | Map between PubMed Identifiers and Manufacturer Identifiers
ri16codPROSITE | Map Manufacturer IDs to PROSITE ID
ri16codREFSEQ | Map between Manufacturer Identifiers and RefSeq Identifiers
ri16codSYMBOL | Map between Manufacturer Identifiers and Gene Symbols
ri16codUNIGENE | Map between Manufacturer Identifiers and UniGene cluster identifiers
ri16cod_dbconn | Collect information about the package annotation DB
ri16cod_dbfile | Collect information about the package annotation DB
ri16cod_dbInfo | Collect information about the package annotation DB
ri16cod_dbschema | Collect information about the package annotation DB