Map FlyBase CG accession numbers with manufacturer identifiers

Description

indacFLYBASE is an R object that contains mappings between manufacturer identifiers and FlyBase CG accession numbers. These accessions are used by Ensembl and supported by FlyBase.

Details

This object is a simple mapping of manufacturer identifiers http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=gene to Flybase CG Accession Numbers.

Mappings were based on data provided by: Entrez Gene ( ftp://ftp.ncbi.nlm.nih.gov/gene/DATA ) on 2008-Apr2

Examples

    x <- indacFLYBASECG
    # Get the manufacturer IDs that are mapped to a Flybase CG ID
    mapped_genes <- mappedkeys(x)
    # Convert to a list
    xx <- as.list(x[mapped_genes])
    if(length(xx) > 0) {
      # Get the FlyBase CG IDs for the first five genes
      xx[1:5]
      # Get the first one
      xx[[1]]
    }
    #For the reverse map FLYBASECG2EG:
    # Convert to a list
    xx <- as.list(indacFLYBASECG2PROBE)
    if(length(xx) > 0){
       # Gets the manufacturer IDs for the first five FlyBase CG IDs
       xx[1:5]
       # Get the first one
       xx[[1]]
    }