Map between custom probeset Identifiers and Kegg pathways

Description

gahgu133bKEGG is an R environment that provides mappings between custom probeset identifiers and Kegg pathways information of corresponding genes.

Details

Each identifier is mapped to a named vector containing Kegg pathways names. An NA is reported if there is no Uniprot information for a given gene.

Within each vector, each element name indicate corresponding Kegg pathways ids.

Mappings were based on data provided by:

GeneCards database - www.genecards.org

Package built Mon Feb 25 23:34:49 2008

References

www.genecards.org

Examples

    # Convert the environment to a list
    xx <- as.list(gahgu133bKEGG)
    if(length(xx) > 0){
        # The Kegg pathways names for the first two elements of XX
        xx[1:2]
        # Get the first one
        xx[[1]]
    }