agARACYC {ag} | R Documentation

## Mappings between probe identifiers and KEGG pathway identifiers

### Description

AraCyc http://www.arabidopsis.org/tools/aracyc/ maintains pathway data for Arabidopsis thaliana. agARACYC maps probe identifiers to the common names of the pathways in which the genes represented by the probe identifiers are involved. Information is obtained from AraCyc.

### Details

Package built Fri Aug 24 17:42:16 2007

### References

http://www.genome.ad.jp/kegg/

### Examples

        # Convert the environment to a list
        xx <- as.list(agARACYC)
        # Remove probe identifiers that do not map to any pathway id
        xx <- xx[!is.na(xx)]
        if(length(xx) > 0){
            # The pathway identifiers for the first two elements of XX
            xx[1:2]
            # Get the first one
            xx[[1]]
        }

[Package ag version 2.2.0 Index]