parentChild-class           package:topGO           R Documentation

_C_l_a_s_s_e_s "_p_a_r_e_n_t_C_h_i_l_d" _a_n_d "_p_C"

_D_e_s_c_r_i_p_t_i_o_n:

     ~~ A concise (1-5 lines) description of what the class is.  ~~

_O_b_j_e_c_t_s _f_r_o_m _t_h_e _C_l_a_s_s:

     Objects can be created by calls of the form 'new("parentChild",
     testStatistic, name, groupMembers, parents, sigMembers, joinFun,
     ...)'. ~~ describe objects here ~~

_S_l_o_t_s:


     '_s_p_l_i_t_I_n_d_e_x': Object of class '"integer"' ~~ 

     '_j_o_i_n_F_u_n': Object of class '"character"' ~~ 

     '_s_i_g_n_i_f_i_c_a_n_t': Object of class '"integer"' ~~ 

     '_n_a_m_e': Object of class '"character"' ~~ 

     '_a_l_l_M_e_m_b_e_r_s': Object of class '"character"' ~~ 

     '_m_e_m_b_e_r_s': Object of class '"character"' ~~ 

     '_t_e_s_t_S_t_a_t_i_s_t_i_c': Object of class '"function"' ~~ 

     '_t_e_s_t_S_t_a_t_P_a_r': Object of class '"list"' ~~ 

_E_x_t_e_n_d_s:

     Class '"classicCount"', directly. Class '"groupStats"', by class
     "classicCount", distance 2.

_M_e_t_h_o_d_s:


     _a_l_l_M_e_m_b_e_r_s<- 'signature(object = "parentChild")': ... 

     _a_l_l_M_e_m_b_e_r_s 'signature(object = "parentChild")': ... 

     _a_l_l_P_a_r_e_n_t_s 'signature(object = "parentChild")': ... 

     _g_e_t_S_i_g_G_r_o_u_p_s 'signature(object = "topGOdata", test.stat =
          "parentChild")': ... 

     _i_n_i_t_i_a_l_i_z_e 'signature(.Object = "parentChild")': ... 

     _j_o_i_n_F_u_n 'signature(object = "parentChild")': ... 

     _n_u_m_A_l_l_M_e_m_b_e_r_s 'signature(object = "parentChild")': ... 

     _n_u_m_S_i_g_A_l_l 'signature(object = "parentChild")': ... 

     _s_i_g_A_l_l_M_e_m_b_e_r_s 'signature(object = "parentChild")': ... 

     _s_i_g_M_e_m_b_e_r_s<- 'signature(object = "parentChild")': ... 

     _u_p_d_a_t_e_G_r_o_u_p 'signature(object = "parentChild", name = "missing",
          members = "character")': ... 

_A_u_t_h_o_r(_s):

     Adrian Alexa

_S_e_e _A_l_s_o:

     'classicCount-class', 'groupStats-class', 'getSigGroups-methods'

_E_x_a_m_p_l_e_s:

     showClass("parentChild")
     showClass("pC")

